Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3102 ATGGTTTCGCTCTCAACATGGTGTCGGTACATGGCTCACAAGCTCGAATACTCCGTATCCATCGGCTGGAAGAACTATAAAGGAGGTCAAATTACAGACAAAGAGGTGACTGATGTTATATGGAAGAATTTCTTTCAAGGAAAGTTGACATACGTGCACTGGAATAAAGGAGAGGAAATGGCCCCTATTTTAGATGGAAAAGGAGTAACTCTTCTTGTTCGGAAGTTACCAAAAGCAGACCCAACGCGTGTTTTTGTAGGAGATGTGGTGGTCTTGAAGGACCCTGAAAAGCAAAACAACCATTTAGTCAGAAGACTAGCTGCTGTCGAAGGCTATGAGATGGCTTCTACAAATGAAAAGGATGAACCCTTCGTCCTTGAGGAGGATCAATGTTGGGTATTGGCTGACAATCAAAAGTTGAAACCAAAGGAAGCATATGATAGTAGAATATTTGGTCCAGTTCAAATGACAGACATTGTGGGCAGAGTCATATATTGCTTGCGCTCTGCGGTAGACCATGGACCTGTACAGAACAGTCAGTTTAGCATGCAGAAGGATTCGCCAGTGTTGGAAGTGGAACTGGATATTGATGAGATGGCAAAGAATGTTATGGTTCCCTGCTCAGCCTCAGGGGTACATGCTATGACCGCCTGGTGCTACTATGCCCGGCGGCAACTTTTTACAGTCATTCGAGGTGACAATCCTTGACTCACATCGTGCTCACGGTACAGTGTCAAGAAGGCCTTAGCAGCATATTTGGAAAGCAGTGAGTACCTTGCTCTTGCTTCAATTGCAGATTTAGCTTCACATATCTTCAGGCTCTCTTGA 828 0.4457 MVSLSTWCRYMAHKLEYSVSIGWKNYKGGQITDKEVTDVIWKNFFQGKLTYVHWNKGEEMAPILDGKGVTLLVRKLPKADPTRVFVGDVVVLKDPEKQNNHLVRRLAAVEGYEMASTNEKDEPFVLEEDQCWVLADNQKLKPKEAYDSRIFGPVQMTDIVGRVIYCLRSAVDHGPVQNSQFSMQKDSPVLEVELDIDEMAKNVMVPCSASGVHAMTAWCYYARRQLFTVIRGDNPXLTSCSRYSVKKALAAYLESSEYLALASIADLASHIFRLS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3102 275 SUPERFAMILY LexA/Signal peptidase 57 175 IPR036286 -
Dere01g3102 275 Gene3D Umud Fragment, subunit A 44 184 - -
Dere01g3102 275 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
Dere01g3102 275 PANTHER OSJNBA0068L06.9 PROTEIN 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3102 Dere-ChrDere01 45511926 45516478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3102 60 176 MADS-box Gene Family AT1G29960 28.226 1.01e-06 45.1