Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3087 ATGAAGCAGAGGATCAAGGAAGCTGGTGAAGACGACAATGGGGTTACTATCAGAAGCAGGATGATTGAGTTTCAGACTTCAGAGCTACCCGACGTGGGTTGTTCCAGCTTTGAAGGTAGCTTCCAATGTCAACTCGTCCTCGGCCGCAAAAGCCGTTTCACAGTCTCGATTCGAAGGGTCCCTCGCCTCCGTTACAACAAGGCTACTCTCGTTCGCTGGGGCCTTCATGTATTGCTGCCTATTACCGCAGCGTCTTGTTCGATTAGTGATAAGCTATCTGTGACCATGTATCTACAGTACTACATAAATGAGAATGGCGATAAAGTCTACACTACTAAGAAAGAGTCGCCGCTCGGGTTAGCGACACAATCTGCTCATCCAGCCCGTTTTTCACCTGACGACAAATTTTCAAGGCAAAGAGTTCTCCTAAAGAAGCGCTTTGGATTGTTGCCGACCCAGCAGCCACCTCCAAAGTATTGA 480 0.4833 MKQRIKEAGEDDNGVTIRSRMIEFQTSELPDVGCSSFEGSFQCQLVLGRKSRFTVSIRRVPRLRYNKATLVRWGLHVLLPITAASCSISDKLSVTMYLQYYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKFSRQRVLLKKRFGLLPTQQPPPKY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3087 159 Pfam Nucleolar RNA-binding protein, Nop10p family 98 147 IPR007264 GO:0001522|GO:0030515|GO:0042254
Dere01g3087 159 SUPERFAMILY Nop10-like SnoRNP 98 153 IPR036756 GO:0001522|GO:0030515|GO:0042254
Dere01g3087 159 FunFam H/ACA ribonucleoprotein complex subunit 3 105 149 - -
Dere01g3087 159 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 105 149 - -
Dere01g3087 159 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 96 159 IPR007264 GO:0001522|GO:0030515|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3087 Dere-ChrDere01 45388082 45394544 Dispersed