Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere01g3085 | ATGGATTCTGCCAGGGGTTGGCTTCAGAAATTTCAGCCGAGGGATAAAATGAGGGCTTCTACGAAGAAGAAGGAGGGTTTTGGTGGAGAAATCGAAGATTCAGATGCACAGTTGGATGAAGAAGCTCTTTCCAATATCACGAAGCAGAAGGTTGCAGCGGCAAAGCAATATATAGAGAACCATTACAAGGAGCAAATGAAGAGCCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTGTTCAAGTTTTTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGCGTTGATGATTTTGAGTTATTGACTATGATTGGAAAAGGTGCATTTGGAGAGGTCAGAGTCTGTAGGGAAAAGACAACAGGCCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAATCTTCTTGCGGAGGTTGACAGTAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGAGTATCTATACCTTATTATGGAGTATCTACCTGGTGGGGATATGATGACTTTACTGATGAGAAAGGATATTTTGACTGAAGATGAAGCTAGATTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCCATACATAAACACAACTATATCCATAGGGATATCAAGCCTGATAATTTGCTACTGGATAGATATGGACACTTAAAACTGTCCGATTTTGGACTTTGTAAGTCATTAGATTGCAGTATGCTTCAAGAGGACTTTTCTGTAGGTCTGAATGCAAATGGTTCTACCCAGAATGATGAACACAGATCTTCAAATCGCACACAACAAGAACAATTACAACACTGGCAAAAGAACAGGAGGACACTTGCTTATTCTACTGTTGGTACGCCAGATTACATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTAGTAGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAATCTCACTTGAAATTCCCTGAAGAAGCTATGCTATCTGCTGAAGCTAAGGATTTGATCAGTAATCTTTTGTGTAATGTGAACCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGTTCATCCATTCTTCAAAGGTACTGAATGGGATAAGCTATACCAAATGGAAGCTGCATTTATTCCTGAGGTTAAGGATGACTTAGATACTCAAAATTTTGAGAAGTTTGACGAGTCTGACAGCAACATTCAACCTTCGTCAAGAAGTGGTCCATGGAGGAAGATGCTCTCATCTAAGGACTTAAATTTTGTTGGATACACGTATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAAAAGAAAACCTTCAAAGTTAAGAGGCCATCCATCAAGTCTCTTTTTAATGGTGATTTAGAAGCATCAGAAGTGTCTGAGGCTTCTGGAAGCAATCAATCTGCATAA | 1599 | 0.3971 | MDSARGWLQKFQPRDKMRASTKKKEGFGGEIEDSDAQLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKSLDCSMLQEDFSVGLNANGSTQNDEHRSSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEAMLSAEAKDLISNLLCNVNQRLGSKGAGEIKVHPFFKGTEWDKLYQMEAAFIPEVKDDLDTQNFEKFDESDSNIQPSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKTFKVKRPSIKSLFNGDLEASEVSEASGSNQSA | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere01g3085 | 532 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 149 | IPR017441 | GO:0005524 | |
| Dere01g3085 | 532 | FunFam | Non-specific serine/threonine protein kinase | 204 | 271 | - | - | |
| Dere01g3085 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 204 | 435 | - | - | |
| Dere01g3085 | 532 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 418 | 490 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Dere01g3085 | 532 | SMART | pkinase_C_6 | 418 | 482 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Dere01g3085 | 532 | CDD | STKc_NDR_like | 118 | 481 | - | - | |
| Dere01g3085 | 532 | Pfam | Protein kinase C terminal domain | 436 | 480 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
| Dere01g3085 | 532 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 37 | 465 | - | - | |
| Dere01g3085 | 532 | CDD | MobB_NDR_LATS-like | 54 | 115 | - | - | |
| Dere01g3085 | 532 | ProSiteProfiles | Protein kinase domain profile. | 120 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere01g3085 | 532 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - | |
| Dere01g3085 | 532 | Pfam | Protein kinase domain | 121 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere01g3085 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 446 | - | - | |
| Dere01g3085 | 532 | FunFam | Non-specific serine/threonine protein kinase | 91 | 203 | - | - | |
| Dere01g3085 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 93 | 470 | IPR011009 | - | |
| Dere01g3085 | 532 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Dere01g3085 | 532 | FunFam | Non-specific serine/threonine protein kinase | 316 | 435 | - | - | |
| Dere01g3085 | 532 | SMART | serkin_6 | 120 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere01g3085 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere01g3085 | Dere-ChrDere01 | 45368178 | 45376092 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere01g3085 | 1 | 513 | AGC Kinase Gene Family | AT2G20470 | 79.383 | 0.0 | 847 |
Transcription factors information