Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3075 ATGCCATTCAAGAGGTATGTGGAGATCGGAAGGGTTGCCTTGGTGAACTATAGGAAGGACTATGGAAAACTTGTTGTGATCGTTGATGTTGTTGACCAAAACAGAATCATAGATGTTAGCGGAAAAGGGGATACGTTGGAACTTGTTCTGGCTTTGGTTGACTTCCCTGATATGGTGAAGACCCAAATGAACTTCAAGAGGGTCTTACTGACAGATATCAAGGTTGACATCAATAAGGTTCCTAAGGAGAAGACATTGATTCAGGCAATTGAGGCTGCTGGTGCATGTCAAGCATTCGACCTAGGCATTTGGATCGAACAGGAAAGATGCCATTATGAGTGCTCTGAAGCTCGCTGCCATCTTGCCGGGATCCTTTTTGCTGCCATTGTGACAAAGAAGCTCTCTGCTTCCAGCTCGCCATCTATTGTAGGAAGTAACTTCATGAAGGAAAGACGCACAATGGGCCAAAGAAGGGCGTCCTGTATAGTAGGGGGTTTGCGTCCTGTCCTTATTTTGTTGCTACTGACTGTTGGATTGATTTTCACCATATGAGTGCAAGTAGGGATATGTTTTTACAATACATATGGTATTGGGAAATCCTTAAGCTTGGTGATTGCCTTTGTGGCTGCAATAATATGA 639 0.4382 MPFKRYVEIGRVALVNYRKDYGKLVVIVDVVDQNRIIDVSGKGDTLELVLALVDFPDMVKTQMNFKRVLLTDIKVDINKVPKEKTLIQAIEAAGACQAFDLGIWIEQERCHYECSEARCHLAGILFAAIVTKKLSASSSPSIVGSNFMKERRTMGQRRASCIVGGLRPVLILLLLTVGLIFTIXVQVGICFYNTYGIGKSLSLVIAFVAAII 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3075 212 CDD KOW_RPL14 7 94 IPR041985 -
Dere01g3075 212 Gene3D - 1 99 IPR014722 -
Dere01g3075 212 PANTHER 60S RIBOSOMAL PROTEIN L14 1 104 IPR039660 GO:0003723|GO:0003735
Dere01g3075 212 SUPERFAMILY Translation proteins SH3-like domain 5 107 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3075 Dere-ChrDere01 45258382 45261957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3075 1 135 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 48.227 8.14e-35 119