Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3071 ATGGCGATGGCTGGGTTGTACAGGCGGTTACTTCCTTCCCCGCCCGCAGTTGATTTCGCTTCGTCTGAAGGAAAGCAACTTTTTCTTGAAGCCATTCAAAATGGATCAATGGAGGGCTTTTATAGGTTAGTTTCTTATTTTCAAACACAATCAGAGCCTGCATACTGTGGATTGGCAAGCTTATCGATGGTCTTGAATGCTCTTGCTATTGATCCTGGAAGAAAATGGAAAGGACCATGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAGCCTCTAGAAAAGGTCAAAGCCAGAGGTATCTCATTTGGAAAACTTGTATGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAAGCCTTTCATGCAAATCAAAGCAACATTGATGACTTCCGTAAATCTGTCATAAGGTGTTCAACTTCCGATGATTGTCATGTAATCTCATCGTATCACAGAGCTGCTCTCCAACAAACAGGAACTGGTCATTTTTCTCCTATTGGTGGCTATCATGCTGGAAAGGACATGGCACTTATTTTGGATGTTGCACGTTTTAAGTATCCTCCTCATTGGGTCCCGCTTACCCTTCTTTGGGAAGGCATGAACTATGCCGATGAAGCCACTGGCCAAACAAGGGGGTTCATGCTTATATCAAGGCCTCACAGGGACCCTGGTATGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAGTATTGCGAAATTCCTGATGGATGATGTTCCCCTTGTACTAAAATCAGAGGATGTGAATGATGTTCACGAGGTTCTTTCAGTTGTAGTCAGTTCACTTCCATCTAATTTTGGGGAGTTTATCAAGTGGGTTGCAGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTGAGTGCAGAGGAGAAAGCTAGGCTTTCTATTAAGGCAGAAGTGTTGAAACAGGTGCAGGAGACACAGCTTTTTAAACACGTGGCTTCTTTTCTGTCAAATTCTTGTTGTAAGCTGTCATCAATTTCAGGTCATGGAGACACCTTACCCAACATTGCGGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTAGGTGGGAAACCTGGCTCATCAGCAGTGTATTGCTGTCGAGAAACTTGTATGAAATGCTTGAAGGCAGAGGGTGACAGGCCAATCACAATGGTTTGTGGGACCGTAGTAAATGGTAACAGTGAACAAGGGGTTGATGTTTTGATTCCTGCTCCTGCTGGCAAACCAAGTTGTGCTTGCTCTTGTCCAAGTAAGTACATTGAGATGCACCCAGCTAGCAATGACGTTCTAACAGTGCTGCTACTTTCATTACCGTCTACAACGTGGGCTGGTATCAAAGATGAGCAGCTTTTGAAGGAAATCGATAGCCTTGTGTCAATTGATAGCCTGCCTACTTTGCTGCAAGAAGAGGTTTTGCACTTGAGACGTCAACTTCATCTGCTCAAGAGATGTCAAGAAAACAAGGTGGATGAAGATCTTGCTCCACCTCTCTCTTAG 1506 0.4422 MAMAGLYRRLLPSPPAVDFASSEGKQLFLEAIQNGSMEGFYRLVSYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKARGISFGKLVCLAHCAGAKVEAFHANQSNIDDFRKSVIRCSTSDDCHVISSYHRAALQQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWVPLTLLWEGMNYADEATGQTRGFMLISRPHRDPGMLYTLSCKHESWISIAKFLMDDVPLVLKSEDVNDVHEVLSVVVSSLPSNFGEFIKWVAEIRRREDGGPSLSAEEKARLSIKAEVLKQVQETQLFKHVASFLSNSCCKLSSISGHGDTLPNIAASVCCQGAEILGGKPGSSAVYCCRETCMKCLKAEGDRPITMVCGTVVNGNSEQGVDVLIPAPAGKPSCACSCPSKYIEMHPASNDVLTVLLLSLPSTTWAGIKDEQLLKEIDSLVSIDSLPTLLQEEVLHLRRQLHLLKRCQENKVDEDLAPPLS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3071 501 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Dere01g3071 501 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dere01g3071 501 Gene3D - 16 221 IPR038156 -
Dere01g3071 501 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Dere01g3071 501 Pfam Domain of unknown function (DUF1984) 231 481 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dere01g3071 501 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dere01g3071 501 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 480 IPR040409 GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3071 Dere-ChrDere01 45226935 45231109 Tandem