Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3035 ATGACAAAGAGGCTGAGTTCATGGAAGAAACAGAGCAAGTGTCTAGAAGGGCCAAAGAGAGAAGCCTATCCGTTGGTTTCGTTCTTCAACGAGGAAAATTATGTTGTTGAAGAAGGATATGATCCTCTGCGAAAGTGGGTGTGTGAAAAAGTTGAAGCCAGAGGAGTGGCGAAGGATTCAAAGAGGCGGATCTTCTACACGCCGTCGTTCCTTACTTGCAAGTTCCGCCAAAAACAGCCAAGGATGCTTGTCGGCGGCTTCTTTGCCGAACATTTAGGAGTCACTGGGTGCTCCACGGCATGGTTACAGAGCTCCATACTGTTCCACGCTTCGCACATTTGTGTTTGTGAATTCTGGTTTGGTGGGAGAAAGAAAATGCCGACTTTGATTATCTTCCTCCTATCTCTTCTCAATTTGCTTTTCTCATGCTCAGTGAAGTCATTTTCTATGAGTGTGTCATTTGTCTCATCAAAGCCGACCAAGTCATGGTTAGTCAACTCTTTGGGACCATCTTCTGCACCTGGGCCATCTCCATCTGATCAAGGTCCTAGTGTCACTCCAAGACCAAGACATCATCATCATTATCATCATCTTCATCATCATATTGGGAGACCTCGTGTTGTTGCTCCACCCCCATCTGACAGCCAAGATTGTGAGCAAACCTGTATGGAGCCACTCATAGCAACTCCCTTTCTTCCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTTATACTGGACGTAGCTCTTTATGCTGTTTTCCCAGTGATGACTGAATTAGAGATTGAAGTTGCATCAGGCACATATATGAAACAGAGCCAGGTAAGGATAATGGGTGCCAGTGCTGACAGCCAAAATCAGGGAAAGACTGTAGTTGATATTAACTTGGTTCCGCTGGGAGAGAAATTTGACAATACCACTGCATTTCTGACCTATGAGAGATTTTGGCAACAGAAAGTTCCTCTAAATAGAAGCCTTTTTGGTGACTATGCAGTCATTTACATCAGTTATCCAGGGATTCCATTACCACAACCATTTGGAAGTGACACAGGGAGTAATCCCAGTGAAAATGCTGGTAGACTTCCATTCACTGCCATCTTCACGAACAAGAACCTGAAAATGAATCTTAGAACTATAATCATGATTGCTTTGTGTACCATTATACTCTTCTTGGTTCTGGTTGGAGCATTTTTCATCTTTTTAAAATGGAGGAAGATTAGAAGATCATCAAGTGCTATTGGTCCTGCATTCAAATCATCTATAAATAAGAGATCTGGCATGGGGTATATGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCTCTTATGTCCACCATGGCTACTTCTATTCTCTCTGCTAGAACATTTAAACTTTCTGAGCTTGAAAAAGCAACAGATAAGTTCAGTTTGAAGAGAGTTTTAGGAGGAGGAGGATTTGGACATGTTTATAGTGGGACCTTGGAAGATGGAACTGAAGTTGCAGTAAAGCTGCTAACCAGGGATAATCCAAATGACGACTCTGAATTTATTGCAGAAGTTGAAATACTAAGTTGCTTGCATCACTGTAACCTTGTGAAACTCATTGGTATTTGCATTGAAGGGCACAGGCGCTGCTTGGTATATGAGCTTATTCCCAACGGTAGTGTTGAGTCTCATTTGCATGGTGCTGACAAGGAAAAGGGACCTCTAGATTGGGAAGCACGGATGAAAATTGCCCTTGGAGCTGCAAGAGGATTAGCCTATCTCCATGAGGATTCTAATCCTCGTGTAATTCACCGTGACTTCAAAGCTAGTAACGTGTTACTAGAAGATGACTTTACCCCCAAGATTTGTGATTTTGGGATGGCAAGAGAAGCAACTAAAGGAAGTCATCATATTTCAACACAGGTCATGGGAACTTTTGGGTATCTTGCTCCAGAATACGCAATGACAGGCCATTTGCTCATTAAGAGTGATGTTTATAGTTATGGGGTAGTGCTACTTGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCTTCTGGACAGGAGAACCTAGTAACCTGGGCACGACCACTCTTGGTGAGTAGGGGAGGCCTAGAACAGCTAGTGGATTCATCTTTGGCAGGAAGTTATGACTTTGATGACACGGCAAAGGTGGCTGCCATTGCTTCAATCTGTGTTCACCCAGAGGTCACTCACAGACCTTTCATGGGTGAAGTTGTGCAGGCTTTAAAGTTGATATACAACGACGCAGATGAGACTTGTGGGGATTGTTCTAGTCAGAAGGGTTCTTCAACTCACGAGTCTGACTTTAGAGTTGATCTTGCCCCTTCTGAAAGCAGTTGGTGGAATGCTGGCGGAGTAACTCCACGATTAACTTATGGGCAAGCATCTTCCTTCATCACTATGGAATACAGTTCTGGTCCACTTGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGGTGAGACCTCTTTACCTGTCAGGCATGGGAACAGATCAGGTCCCTTAAAAAAAGTCCGTAGCAAGCTATCCTTGTATAAATTTACAGGAAGTCGGAGTGAACACGGGGGATTTCCTTCCAAGAAGTTTTGGAATGAAGGCTTCTGGATTCTCTTTCAACCTCCCACGGCGAAATTAACCCACTTCAGACTTGGACGTTGCAATTATTTTTGCTTTTCGTCAACTCTTCCCCGCTGCAAAAACTTTGGTGCGAAGATGTCCTCCGATTCCTTGCCTCAAAACCCTGTCATCTTGGGGTGTGGATCGTTGTCGGTGGATTATTTGGCTACAGTTGCCGCTTATCCTAACCCAGATGACAAAATCAGAAGCGCCAGCTTAAAGGTTCAAGGTGGTGGCAACGCAGGTAATGCTTTAACATGCGCAGCTCGCTTGGGACTAAAACCAAGGCTGATCTCCAAGGTTGCGGATGACACTCAAGGCAGGGGTTTATTAGACGAGCTAAAGGCTGATGGTGTAGATACGTCTTTTATGGTGGTTTCTAAGGAGGGCACTTCTCCATTTACTTATATCATTGTAGACAATAAGACTAAGACTCGTACTTGTATACATACCCCAGGATATCCTCCTATGGTGCCAGAAGATCTTCCCAGATCAAGTTTGTTATCTGCATTGGATGGCGCACAAATTGTTTATTTTGATATGAGGTTGCATGAAACTGCTCTAGTTGTTGCACAAGAGGCAGTTCGGAGGAATATTCCCATATTAATTGATGCAGAAAGGCTAAGGGAAGGGCTGGATGATCTCCTAATATTAGCTGATTATGTTGTTTGCTCGGCAAAATTTCCGCAGGCATGGACAGAGGCATCGACTGTTCAAAGAGCACTTGTTTCTATGCTTATAAGGTTGCCCAAGATCAGATTTGTGATTGTAACCTTGGGAAAAGATGGTTGCATAATGCTTCAGAGAAGTGATAACAAGGGTCCTTCCACAGAAGTGGATGTTGACACTTTACTGGAATCATTAGAGATGAGAAAGAAGGAGAACATATCAATCCCGACCTGTATATTAACGTCAGTGACAAAATTGAAGGCAGAAGGGATAGGAGCAGTTTGTGGGAGGTTATATCTTGGAACAGCCGAGAACATACCACTGTCAGAGCTTATTGATACCACCGGTGCTGGTGATGCATTTATTGGAGCCGTTCTCTATGCTATCTGTGCCAACTTTTCACCAGACAAAATGCTGACCTTTGCTGCTACTGTGGCAGCTGCGAAGTGCAGAGCTTTAGGAGCACGAAGTGGTCTTCCATACCATGGAGACCCTTGCCTGGCATCCTTTTTGCAGTAG 3813 0.439 MTKRLSSWKKQSKCLEGPKREAYPLVSFFNEENYVVEEGYDPLRKWVCEKVEARGVAKDSKRRIFYTPSFLTCKFRQKQPRMLVGGFFAEHLGVTGCSTAWLQSSILFHASHICVCEFWFGGRKKMPTLIIFLLSLLNLLFSCSVKSFSMSVSFVSSKPTKSWLVNSLGPSSAPGPSPSDQGPSVTPRPRHHHHYHHLHHHIGRPRVVAPPPSDSQDCEQTCMEPLIATPFLPPCGCVFPMKVRLILDVALYAVFPVMTELEIEVASGTYMKQSQVRIMGASADSQNQGKTVVDINLVPLGEKFDNTTAFLTYERFWQQKVPLNRSLFGDYAVIYISYPGIPLPQPFGSDTGSNPSENAGRLPFTAIFTNKNLKMNLRTIIMIALCTIILFLVLVGAFFIFLKWRKIRRSSSAIGPAFKSSINKRSGMGYMLSSSITSSTSVSLMSTMATSILSARTFKLSELEKATDKFSLKRVLGGGGFGHVYSGTLEDGTEVAVKLLTRDNPNDDSEFIAEVEILSCLHHCNLVKLIGICIEGHRRCLVYELIPNGSVESHLHGADKEKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKICDFGMAREATKGSHHISTQVMGTFGYLAPEYAMTGHLLIKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPLLVSRGGLEQLVDSSLAGSYDFDDTAKVAAIASICVHPEVTHRPFMGEVVQALKLIYNDADETCGDCSSQKGSSTHESDFRVDLAPSESSWWNAGGVTPRLTYGQASSFITMEYSSGPLEMENRPFSTSSLIGGETSLPVRHGNRSGPLKKVRSKLSLYKFTGSRSEHGGFPSKKFWNEGFWILFQPPTAKLTHFRLGRCNYFCFSSTLPRCKNFGAKMSSDSLPQNPVILGCGSLSVDYLATVAAYPNPDDKIRSASLKVQGGGNAGNALTCAARLGLKPRLISKVADDTQGRGLLDELKADGVDTSFMVVSKEGTSPFTYIIVDNKTKTRTCIHTPGYPPMVPEDLPRSSLLSALDGAQIVYFDMRLHETALVVAQEAVRRNIPILIDAERLREGLDDLLILADYVVCSAKFPQAWTEASTVQRALVSMLIRLPKIRFVIVTLGKDGCIMLQRSDNKGPSTEVDVDTLLESLEMRKKENISIPTCILTSVTKLKAEGIGAVCGRLYLGTAENIPLSELIDTTGAGDAFIGAVLYAICANFSPDKMLTFAATVAAAKCRALGARSGLPYHGDPCLASFLQ 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3035 1270 ProSitePatterns Protein kinases ATP-binding region signature. 476 498 IPR017441 GO:0005524
Dere01g3035 1270 Gene3D Phosphorylase Kinase; domain 1 441 545 - -
Dere01g3035 1270 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 1211 1224 IPR002173 GO:0016301
Dere01g3035 1270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Dere01g3035 1270 ProSiteProfiles Protein kinase domain profile. 470 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3035 1270 Pfam pfkB family carbohydrate kinase 1203 1258 IPR011611 -
Dere01g3035 1270 Pfam pfkB family carbohydrate kinase 923 1146 IPR011611 -
Dere01g3035 1270 MobiDBLite consensus disorder prediction 167 192 - -
Dere01g3035 1270 CDD ribokinase_group_B 918 1259 - -
Dere01g3035 1270 FunFam Receptor-like serine/threonine-protein kinase ALE2 546 762 - -
Dere01g3035 1270 Pfam Protein tyrosine and serine/threonine kinase 471 684 IPR001245 GO:0004672|GO:0006468
Dere01g3035 1270 PANTHER OS01G0750732 PROTEIN 210 766 - -
Dere01g3035 1270 Gene3D - 918 1255 IPR029056 -
Dere01g3035 1270 PRINTS Ribokinase signature 1130 1141 IPR002139 GO:0016301
Dere01g3035 1270 PRINTS Ribokinase signature 948 967 IPR002139 GO:0016301
Dere01g3035 1270 PRINTS Ribokinase signature 921 942 IPR002139 GO:0016301
Dere01g3035 1270 Gene3D Transferase(Phosphotransferase) domain 1 546 766 - -
Dere01g3035 1270 CDD STKc_IRAK 476 745 - -
Dere01g3035 1270 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 545 - -
Dere01g3035 1270 SUPERFAMILY Ribokinase-like 919 1260 IPR029056 -
Dere01g3035 1270 SUPERFAMILY Protein kinase-like (PK-like) 449 745 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3035 Dere-ChrDere01 44866446 44887075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3035 215 858 Receptor kinase-like Gene Family AT5G56890 53.394 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dere01g3035 PfkB 3.1e-24 CL0118