Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3030 ATGGATGAAGTGAAGCTGTTCGGAGCTTGGCCAAGTCCTTATGTTTACAGGATCATATGGGCTTTACAACTGAAGGGTGTGAAGTATGATTATGTGGAAGAGGATTTAGCTAACAAAAGTGATTTTCTATTGAAGTACAACCCAGTTCATAAAAAAGTTCCAGTTCTTGTTCACAACGGCAAGCCAATCTCAGAATCCACTGTCATCTTGGAGTATATAGAAGAAACATGGCCTCAACCACCCCTGCTTCCACAGGACCCTTATGAGAGAGCCATGGCTAGGTTCTGGGTCAAGTTTATAGAGGAAAAGAGCATTGCATTTGTGTCATTCTATTTGACTCATGGAGAAGAGCATGAGAAGGGAACAAAGGAAGTCAGAGAAGTGTTCAAGATTTTAGAGGAACAAGCCCTTAGAGAGAATAAATATTTTGCTGGGGATGAGATTGGGTTAGTTGATTTAGTCGTAGGATGGATAGCAATGTCATTTAGTGATATTGAAGAAGCTGCTGGCGTTAGAGTGCTGAACGTCAATGATTTCCCTCGATTGCATGCATGGATTCCGAACTTCAGAGAAAACCCGGCAATCAAAGCAAACCTTCCAAACGATGATAAAAAGCTAGCTTATTACAAGCAAAAGAGGGAAATGATTATCGCATCCAAACAAGCATAA 669 0.4096 MDEVKLFGAWPSPYVYRIIWALQLKGVKYDYVEEDLANKSDFLLKYNPVHKKVPVLVHNGKPISESTVILEYIEETWPQPPLLPQDPYERAMARFWVKFIEEKSIAFVSFYLTHGEEHEKGTKEVREVFKILEEQALRENKYFAGDEIGLVDLVVGWIAMSFSDIEEAAGVRVLNVNDFPRLHAWIPNFRENPAIKANLPNDDKKLAYYKQKREMIIASKQA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3030 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
Dere01g3030 222 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Dere01g3030 222 Gene3D Glutaredoxin 1 85 - -
Dere01g3030 222 CDD GST_N_Tau 4 77 - -
Dere01g3030 222 FunFam Tau class glutathione S-transferase 1 85 - -
Dere01g3030 222 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Dere01g3030 222 Gene3D - 86 220 - -
Dere01g3030 222 Pfam Glutathione S-transferase, C-terminal domain 116 192 IPR004046 -
Dere01g3030 222 CDD GST_C_Tau 88 211 IPR045074 GO:0004364|GO:0006749
Dere01g3030 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Dere01g3030 222 SFLD Main (cytGST) 1 220 - -
Dere01g3030 222 FunFam Tau class glutathione S-transferase 83 219 - -
Dere01g3030 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Dere01g3030 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 204 IPR045073 -
Dere01g3030 222 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3030 Dere-ChrDere01 44770521 44771278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3030 2 214 Glutathione S-transferase Gene Family AT2G29420 45.794 2.15e-65 200