Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3025 ATGTTGCTTTCTGTATCATGGAAATCCAAATCCCAAACTCATAAATCAACTGCGGTTTACCCAAGTCGGTGGAGCATACTGGCGCTACCATTTTGCATATCTATTCTTCTTCTTCTTCTTCCCGATCTCACCCTTACTGCCACCAACTTCACCCCACATTGCTTTCCCCTTTCACCTTCCTATCTTTTTTGTTTATACTCGTATGTGAGCTCTGGTTTTGCTTCGGTTGGTGAAATTTTGAGCCTTGGGGGTGGGCAATGTTGCATTCTGGCTACTGAAATGAATGGAATACAGGACAGAAGATTTCACAATAATGAGAAGCCTTTTCAAGGATGCTTGGGAAGAATGGTGAACCTCTTTGATTTGACTGCAGGTGTGACTGGAAACAGGCTACTCACTGATAAGCCGCATCGTGATGCTTCTCCGCTTTCAAGGAGTCAATCAGATGTTGCAAGGATCACAAGCCTTTCTTTTGGTGATCAGGTGGAGGATAAACTGATTGTTTCTGACTCAAGGAGATCATCATCAAAGAAGAAAACAATTGGAACACCTATCAAGATGCTCATAGACCAAGAAATGTCTAAAGAAGTTGATTCCAAGCACAGCCCACCAAATGTTGTTGCTAAACTAATGGGGCTTGAAACCCTTCCATGGGAGGAGCCTAACCAAGCTGTGCAGAGAAGCCATAGAAAAGATTATTCTGAACACACATGTGGTCATTCAGGGAAGCCATTCAAACATTGGCAGCTGCAAGATAGATTTATGGACAAGGAAATGCTGTGTGAAGTTCATCCGTGCACTGAAAAGATTGATTACAAAGGTATTTATGAATTATGTCGGCAACCTCAGAGAACAATCAATGTAAGAGATACAACAGCAGAGAGAGTAAGGTGGACAGAAGATGTTAATGGGAAAAAAATGGCTCTCATTCAACAGAAATTTATGGAAGCAAAACGTCTATCTACTGATGAGAGACTACGCCAGTCCAAAGAATTTGAAGATGCCTTGGAAGTTTTAAGCTCCAATAAAGATCTGTTCCTCAGGTTTTTGGATTCTCAAAATCTTTATGAACTTCAGTCCACTCCGCGGCCACAACCTGAAACAAAGCGTATTACTGTTCTTAAACCTTCGAAGATGCTTGACAATGATAAATCTGTTGTAAAGGGGAGGAAGGATGATAAACAGATAAAAAAACCAACAAATTTTGGTCAAGCAGCTGTATGGGACATAAAGAACCCTGGATACTCTCCGCCTGCCCAGAAGGTTGACGATTGTCAAGTTCAGCATACTCGAATAGTGGTATTAAAGCCTAGTTCTGCTAAGAGACATGATTTTAAGGCATTGCTTTCTCCAACTTGTTCATCACCTCAAAATTTGCAATGCGGAAATTTCCATAAGGGACCTGAAGATTGTAATGTACCTGAGTCAAGAAAAGTGGCAAAAGAGATCACACACCAAGCACATGAAGACCCGTCAAGCCATCAAAGGGATGAAACTTTGTATTCTTCAGTCTGTTCTAATGGCTACACAGGTGATGAGAGTTCATTTAACAGATCAGAAAATGATTATGCAGTGGGGAATTTTAGTGAATTGGAAGTTATGTCACCATCTCCAAGGCATTCATGGGATTATGTAAATCGTTGCAACAGTCCTTATTCTCCATCATCCTTCAGCCGTGTATCCTGTTCTCCTGAGTCATCAGTTTGCAGGGAGGCAAAGAAACGTCTTTCTGAAAGATGGGCCATGATAGCATTAAATAAGGGTCCTCAAGAACAAAGGCATGTGCGCAGGAGCTCTTCCTTGGGTGAGATGCTTGCCCTTTCAGATACAAAGAAATCTGTATCATCGGAGATTGAGGGTATCACTAAAGAACAAAATACAAGGGAATCTGTTTCCTGCAATAGTAATACCAATGGAGAATTACAGGTGAATGATTCTCCTAAAAATCTTCCAAGGTCAAAATCGGTTCCTGTATCTTCTACTGTCTATGATACTGGGCTTGGTGTTGAAGTTTGTGATCCTGAGGCTGGAAAAGCACATGACTTCAAGGATCTGACAAAGTCAAAAAGCATGAAATCATTTAAAGGGAAAGTTACAAGTTTGTTCTTCTCAAGGAATAGGAAATCAACTAAGGAAAAATCTAGTTTATCTCAACCTAAAGATGAACTTCAATCTGCCACTGAAACATCTGGATCTCTAGCAAATTCTCCTGGAATTCTGAGGGATAACATGTCTCAAAACATCAGCAATGGTGGATTTGGAGAGTGTCCTCTTCCTGCTCAATGTGAATTATCAGGCAATACTTTATCTGATTCACTCTCCAAAGGACAAGGCATAACATTGCTAGAGCATGGATTGATGGTGTCAAAGCCTGTGATGCCTGGGATATCAAGCGAAAACCAGGACCAGCCTAGTCCAATATCAGTTTTAGATACTCAATTTGGAGATGATAATGCAGCTCAGGAGTCCTTGGACTGTATAAAGACTGGTCACTTGGGAACAGGGGTGCCTCTGAAGTCTAATTTAATTGACAAATCACCACCCATTGAATCCATAGCTCGGACCCTGTCATGGGAAGAATCTGGTGCGGAGGTAGCAAGTTCGTATCCCTTAAAATCCTTGACAGTTTCCTTAGACGCTAAGGTAGAGGAACAAGACTGGCTTGTCTTTGTACAGAAATTACTATCAGCTGCCGGACTTGATGACCAAGTGCAGTCAGACTCGTTTTACTCTAGATGGCATTCCCTTGAAAGTCCATTGGATCCATCATTAAGGGACAAATATGCCAATCTTAATGACAAGGAGCCTCTCCATGAGGCCAAACGAAGGCAGAGGAGATCAAATCCGAAGCTTATATTCGACTGTATCAATTCTGCGCTAAAGGAAATAACTGGTTATGAATCAGAAATATACTTCTTGGGCAGAATGAGCTGCAGGAGCCATAGCCGTCTCGCTGAGGGTACATCTACCCTACTAGTGGACCTGATAGTGACCCAAATGAAGGAATTAATATCTAGTGAGGTGCGTTTTGTTTGGGGAGATTGTGGGGACAGTTACAGCGTGGTGGTAGACAGCGTTGTCCAGAAAGAGGTTGTGGGAAAAGGGTGGGTTGAGCTTATGGGATTGGAGACTGCTAATTTAGGGAAGGAAATAGAAGGTAAGTTGCTTGACGAACTTGTGGAGGAAGCTGTGGTGGATTTGACGGGTAGAACCCTATGA 3219 0.4206 MLLSVSWKSKSQTHKSTAVYPSRWSILALPFCISILLLLLPDLTLTATNFTPHCFPLSPSYLFCLYSYVSSGFASVGEILSLGGGQCCILATEMNGIQDRRFHNNEKPFQGCLGRMVNLFDLTAGVTGNRLLTDKPHRDASPLSRSQSDVARITSLSFGDQVEDKLIVSDSRRSSSKKKTIGTPIKMLIDQEMSKEVDSKHSPPNVVAKLMGLETLPWEEPNQAVQRSHRKDYSEHTCGHSGKPFKHWQLQDRFMDKEMLCEVHPCTEKIDYKGIYELCRQPQRTINVRDTTAERVRWTEDVNGKKMALIQQKFMEAKRLSTDERLRQSKEFEDALEVLSSNKDLFLRFLDSQNLYELQSTPRPQPETKRITVLKPSKMLDNDKSVVKGRKDDKQIKKPTNFGQAAVWDIKNPGYSPPAQKVDDCQVQHTRIVVLKPSSAKRHDFKALLSPTCSSPQNLQCGNFHKGPEDCNVPESRKVAKEITHQAHEDPSSHQRDETLYSSVCSNGYTGDESSFNRSENDYAVGNFSELEVMSPSPRHSWDYVNRCNSPYSPSSFSRVSCSPESSVCREAKKRLSERWAMIALNKGPQEQRHVRRSSSLGEMLALSDTKKSVSSEIEGITKEQNTRESVSCNSNTNGELQVNDSPKNLPRSKSVPVSSTVYDTGLGVEVCDPEAGKAHDFKDLTKSKSMKSFKGKVTSLFFSRNRKSTKEKSSLSQPKDELQSATETSGSLANSPGILRDNMSQNISNGGFGECPLPAQCELSGNTLSDSLSKGQGITLLEHGLMVSKPVMPGISSENQDQPSPISVLDTQFGDDNAAQESLDCIKTGHLGTGVPLKSNLIDKSPPIESIARTLSWEESGAEVASSYPLKSLTVSLDAKVEEQDWLVFVQKLLSAAGLDDQVQSDSFYSRWHSLESPLDPSLRDKYANLNDKEPLHEAKRRQRRSNPKLIFDCINSALKEITGYESEIYFLGRMSCRSHSRLAEGTSTLLVDLIVTQMKELISSEVRFVWGDCGDSYSVVVDSVVQKEVVGKGWVELMGLETANLGKEIEGKLLDELVEEAVVDLTGRTL 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3025 1072 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 94 1070 - -
Dere01g3025 1072 MobiDBLite consensus disorder prediction 625 659 - -
Dere01g3025 1072 MobiDBLite consensus disorder prediction 719 746 - -
Dere01g3025 1072 MobiDBLite consensus disorder prediction 614 659 - -
Dere01g3025 1072 MobiDBLite consensus disorder prediction 707 746 - -
Dere01g3025 1072 Pfam Domain of unknown function (DUF4378) 888 1062 IPR025486 -
Dere01g3025 1072 Pfam DUF761-associated sequence motif 203 217 IPR032795 -
Dere01g3025 1072 Pfam Protein of unknown function (DUF3741) 311 354 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3025 Dere-ChrDere01 44744026 44750522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3025 94 1068 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.277 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3025 01 44744026 44750522 Dere02g0876 02 8335223 8339274 CCT
Dere01g3025 01 44744026 44750522 Dere01g3025 01 44744026 44750522 ECH