Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3009 ATGGAGTTACCAGAATATCTAAGCAACCCTTGGAAAGAATTACCCTCCGGTCCTTCCCTTCGTGCTATTCCTCTTCCAAAGCCGTCTTTAACCGTCGCCTTCCTCCCTCACCTCCGCCTCCGGCATCTCCAAGTGTTTCGTCGGCGTTATGATCTTCCCTCTCTGTCGGCATCTCGCAGTTGCTTCATTGAACGACTTCGTCTTCCTTCACTGAGAAGTGCAGGGGCTAAGCTTCGTGAATGGCTCTGGAAACTGAATCAATTTCAACCCCGTCTAACGCCTTATCTTCTGTGTTCCTGCCTACATTGGTGGTTGACTAAAGCTGAAAAGGACTTCAACGGAAGGCTATTAGCTGTTGCAGGCTACACCTCCAGAGAGCAAGATGCAAAGCGGGAGTTTATTTCTGCTCCAATAATCAAAAGACATGATCTATGTACCTTGGAGACAGCAGACGGGATCCATCTTATTATTACAGGTTTCATCAATGAGCTGCGCACTGAGGAAAATGGCTTTCCATATGAGGTTTTCAATCATTTTTTATTTGGCTTTCCTCCAGACTGGGAATACTATGCTGCTAACTGCTTCAAAGAAGTTACCACTCGTAATGATTCAGGAAATATCCTAAATTCTAAAGAAGAAGAACCAAAAAGCCCAGTTACGTCCATTCAATCACAGGGAGAAATGAATGAGTTATCTGAACAGTTTGTTGGAGAATCTGCATCCAGAAGATCTAGAACTCTGTCAGCAAATACTGAAAGCCAATGTAATAATAAGAAAGTGGTCTGTGGGTTAGCTAGCCCAAAAACGACAAAGTCTAACACAAAAATGACTAGGTCTAACACAAAAATGACTAGGTCTAAATCAGCTGATCCTAAAAGGAAAAAGACGAAGTCTATTTCAGCTGACTCTTCAGAGGAGAGCTTGTCTGTTAATAGGATTAACAAGAGAATAAATTTTGTTACACATGAGAAAATATGCACAGTTTCTCCAGAATTGTCTAATTTCAGAAGATCCAGATCAGGTAGGCTGCTTCTTCCTCCTTTAGAGTTCTGGCGCAATCAGATGCCAGTTTATGATGCGGAACACAGCCTAACAGAAATCCAGGATGGTGCATCTTTTGTGTCACCTTGCAGAGGAAGTGGAAAACAATCCCGGAAAAAGCAAAGGCTGTAG 1173 0.4288 MELPEYLSNPWKELPSGPSLRAIPLPKPSLTVAFLPHLRLRHLQVFRRRYDLPSLSASRSCFIERLRLPSLRSAGAKLREWLWKLNQFQPRLTPYLLCSCLHWWLTKAEKDFNGRLLAVAGYTSREQDAKREFISAPIIKRHDLCTLETADGIHLIITGFINELRTEENGFPYEVFNHFLFGFPPDWEYYAANCFKEVTTRNDSGNILNSKEEEPKSPVTSIQSQGEMNELSEQFVGESASRRSRTLSANTESQCNNKKVVCGLASPKTTKSNTKMTRSNTKMTRSKSADPKRKKTKSISADSSEESLSVNRINKRINFVTHEKICTVSPELSNFRRSRSGRLLLPPLEFWRNQMPVYDAEHSLTEIQDGASFVSPCRGSGKQSRKKQRL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3009 390 MobiDBLite consensus disorder prediction 205 228 - -
Dere01g3009 390 Pfam SANTA (SANT Associated) 102 189 IPR015216 -
Dere01g3009 390 MobiDBLite consensus disorder prediction 266 284 - -
Dere01g3009 390 MobiDBLite consensus disorder prediction 266 307 - -
Dere01g3009 390 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 204 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3009 Dere-ChrDere01 44607837 44612120 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere01g3009 SANTA 2.3e-24 No_clan