Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3007 ATGGTATTCAACATAAGCTCCATCAAAACGTCGTCGAATGGAGCCTGGCAAGGCGATAACCCCTTGGACTACGCCTTCCCACTTCTCATACTTCAAACCACCTTGATCCTCCTCGTTAGCCGTTCTCTCGCTTTCCTTCTCAAACCTCTTCGCCAACCCAAAGTCATCGCTGAGATTGTCGGTGGAATTCTGCTAGGCCCATCGGCTTTTGGAAGGAACCAAACTTACATGCACCGTATATTCCCATCTTGGAGCACACCTATACTGGAATCCGTCGCAAGCATAGGCCTTCTCTTTTTTCTCTTCCTCGTCGGTCTCGAATTGGACTTAACCTCCATTCGCCGGAGCGGTCGGCGAGCCTTTACCATAGCCGCAGCCGGAATCTCCATTCCTTTCATTTCCGGCATCGGCGTCGCTATTGTTCTCCGAAAAACCGTCGACGGGGCCGACAAGGTCGGTTTCGGTCAGTTTCTGGTCTTCATAGGCGTGGCGCTGTCCATCACAGCATTCCCTGTGCTCGCTCGTATATTAGCAGAGCTCAAGCTCTTAACTACCCAAATCGGAGAGATCGCGATGGCCGCAGCCGCATTCAACGACGTCGCAGCGTGGATCTTGCTCGCTCTCGCCGTGGCTCTCGCTGGCGACGGGGGGCACCAAAAGAGCCCGCTAGTGTCAGTGTGGGTTCTTCTGTCAGGGGCTGGTTTCGTTATTTTCATGATGGTTGTGATCCGACCCGCCATGAAATGGGTTGCCCGGAGATGCTCCCCGGAGCACGAGGCCGTCGACGAGGCTTATATCTGCTTGACCTTGGCGGGAGTGATGGTGTCGGGGTTCATGACGGACTTGATAGGGATCCATTCCATATTCGGAGCCTTCGTGTTCGGATTGACTATTCCGAAAGGAGGGGATTTCGCGGAGAGACTGATAGAGAGAATCGAAGACTTTGTGTCTGGTCTGCTTCTTCCTCTTTATTTTGCATCGAGCGGCTTGAAGACTGACGTGGCAAAAATCCGAGGCGGACAGGCGTGGGGGCTACTGGTCTTGGTGATAACCACCGCATGCGCCGGCAAGATACTGGGGACGTTCGCGGTGGCGATGATGTGTTTAATGCCGGCGAGGGAATCCTTCACGCTTGGTGTCCTCATGAACACCAAAGGCCTGGTGGAGCTCATCGTACTCAACATTGGCAAGGAGAAAAAGGTTCTGAACGACGAGATGTTTGCTATTTTGGTTCTAATGGCTCTGTTCACCACCTTCATCACAACCCCATCAGTGATGGCCATCTACAAACCCGCACGTGGCATCTCGGCGAGGACCCACCGAAGGCTAGGCGACCTGACTTCGAGCTCCAAGAAAGAGAAGGCGAGCGAGCTGCGAGTGCTAGCCTGCGTGCACGGCCCTGGCAACGTACCCTCCATCATCACTCTCATCGAGTCCACTCGCAGCACCACCAATTCCTCCCTCAAGCTCTTCATCATGCACCTCGTCGAGCTCACCGAACGCTCCTCCTCCATCATCTTGGTCCAACGAGCCCGCAAGAATGGCTTCCCGTTCTTCAACCGCTTCCACCGCGGCCAATGGCACGACCGCCTCGCCGGCGCCTTTCAGGCCTATAGTCAACTGGGCCGGGTTAAGGTCCGGCCCAGTACAGCTATCTCTTCTCTGTCGACCATGCATGAGGATATTTGCCACGTGGCGGAGGAAAAGAGGGTGGCTATGATTATCTTGCCCTTTCACAAGCAGTGGAGGACGGAAGTGGATGAAGAAGACAATGGGAAGCATGAGGTGTTGGAAAATGTGGGCCACGGTTGGAGAGGGGTTAACCAGAGGGTGCTAAAAGATTCGCCATGTTCTGTGGCAGTGCTTGTGGACCGAGGATATGGGAATGGGTCTCAGACACCCGGCCCAACTTCTTATTCGGCCCAACGGGTCTGTGTTCTGTTCTTTGGTGGGCCCGATGATCGTGAGGCCTTGGAACTGGGCGGGAGAATGGCTGAGCATCCGGCAGTTAAGGTTACGGTCATGAGATTCATTGATAAGAATGGATTGGAGGGGAACGGCGTCGTGTTACGCCCCTCCCCGAATAAGTGCAGTGAGAAAAGCTACAGCTTCTCCACCGCTATAATGAACCGCGAAAAAGAGCAGGAGCTGGATGAAACAGCGGTGGTCGAGTTCAGAAGCAAGTGGAATGGGATGGCGGAGTACATAGAGAAGGCGGCGAGCAACATGGTGGAGGAGGTGTTGGGGATAGGGCGGAGTGGGGATTACGATCTGATAGTGGTTGGGAAGGGGCGGTTTCCGTCGAGCATGGTGGCGGAATTGGCAGAGAGGCAGGCGGAGCACGCGGAGTTGGGTCCGATCGGGGATATTCTGGCGTCGTCGGGACAAGGGGTGGTGTCGTCGGCGCTGGTGATTCAGCAACACGATGTGGAACTGGCAGAGGAGGCTCCTGCGTCAAAGGTGAGGGCTAGGTACAACAATGTCAAAGCCGACGAGTCGTCCAGGGGAAAAGGGATTTCAATATCAAACGACAACGTAGTGTAA 2544 0.548 MVFNISSIKTSSNGAWQGDNPLDYAFPLLILQTTLILLVSRSLAFLLKPLRQPKVIAEIVGGILLGPSAFGRNQTYMHRIFPSWSTPILESVASIGLLFFLFLVGLELDLTSIRRSGRRAFTIAAAGISIPFISGIGVAIVLRKTVDGADKVGFGQFLVFIGVALSITAFPVLARILAELKLLTTQIGEIAMAAAAFNDVAAWILLALAVALAGDGGHQKSPLVSVWVLLSGAGFVIFMMVVIRPAMKWVARRCSPEHEAVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGDFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIRGGQAWGLLVLVITTACAGKILGTFAVAMMCLMPARESFTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPSVMAIYKPARGISARTHRRLGDLTSSSKKEKASELRVLACVHGPGNVPSIITLIESTRSTTNSSLKLFIMHLVELTERSSSIILVQRARKNGFPFFNRFHRGQWHDRLAGAFQAYSQLGRVKVRPSTAISSLSTMHEDICHVAEEKRVAMIILPFHKQWRTEVDEEDNGKHEVLENVGHGWRGVNQRVLKDSPCSVAVLVDRGYGNGSQTPGPTSYSAQRVCVLFFGGPDDREALELGGRMAEHPAVKVTVMRFIDKNGLEGNGVVLRPSPNKCSEKSYSFSTAIMNREKEQELDETAVVEFRSKWNGMAEYIEKAASNMVEEVLGIGRSGDYDLIVVGKGRFPSSMVAELAERQAEHAELGPIGDILASSGQGVVSSALVIQQHDVELAEEAPASKVRARYNNVKADESSRGKGISISNDNVV 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3007 847 FunFam Cation/H(+) antiporter 15 28 436 - -
Dere01g3007 847 Pfam Sodium/hydrogen exchanger family 36 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere01g3007 847 Gene3D - 28 434 IPR038770 -
Dere01g3007 847 PANTHER CATION/H + ANTIPORTER 7 809 - -
Dere01g3007 847 Gene3D - 489 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3007 Dere-ChrDere01 44589556 44594157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3007 76 821 Antiporter Super Family AT3G53720 69.921 0.0 975