Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2985 ATGGAGAACCTGCCAAAACCTCGGTTCGAAAGAGTGAAGCCATTTATAGCTGTCATTTTCTTGCAATTTGGATTTGCAGGTATGGATGTTCTATCTAAGGCTGCATTGAACAAGGGGATGAGCAACTACGTACTCGCTGTCTACCGACATGTTGTTGCCTTTGTTGTAATGAGCCCTTTTGCAGTGATCCTGGACAAGAAAGTAAGGCCCAAGATGACACTGTCAATCTTCATGAAGATAGTGGCGCTAAGCATTCTAGAGCCCGTTATTGACCAGAATTTGTATTTTCTGGGAATGAAGTACACAACAGCAACGTTTGCCGCTGCAATGACCAATATGCTTCCCGCCATTACCTTCTTGATGGCTTGGATACTTAGGCTTGAGAAGATAAAAATCAAAAGCATACGCAGCCATGCAAAGGTGGTTGGAACTGTAGCTACAGTTGCTGGAGCCATGGTCATGACATTGTTGAAAGGCCCGGTGCTCCAAATTTTGGGGGCACACGGAAGCAATAACGACAACCAGCATAATGGCGGGGCAAATCTTCAACATGTAATAAAGGGATCTGTGATGATCACGATTGGCTGCTTTAGTTGGGCTTGTTTCGTGATTCTCCAAGCCATTACCCTTGAAACCTACCCTGCTGAGCTCTCACTGACAGCATGGATATGCCTGTTGGGAGCAGCTGAAGGCGCCATAGTAGCCCTGGTTATGGAAAGGGACAACCCTTCAATTTGGTCTCTGCATTGGGATACGAAACTGCTGGCTGCTGTCTACAGTGGCATAGTCTGCTCAGGACTAACTTACTATATACAAGGAGTAGTGATGAAATCAAGAGGACCCGTCTTCGTGACAGCATTCAATCCCCTATGCATGGTAATTGTAGCAGTCATGGGCTCCTTCTTTCTGTTTGAGCAAATATACCTCGGAAGGGTGATTGGTGCCATTGTCATTGTTTTGGGCCTGTACCTTGTGATTTGGGGTAAAAGCAAAGATTATGATTCACCTACTCCAGTTACCAAAGAGCAATTATCGCCAGCTAAGCTAATTCCAGATGAGAGCAGTGCTAGAAAGGACAATTCTAATCACGAGGTCATCACTATCACTAACTCTGGAGCAGGAATCAAAAGACAGGATGAACAAGTATGA 1149 0.4517 MENLPKPRFERVKPFIAVIFLQFGFAGMDVLSKAALNKGMSNYVLAVYRHVVAFVVMSPFAVILDKKVRPKMTLSIFMKIVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFLMAWILRLEKIKIKSIRSHAKVVGTVATVAGAMVMTLLKGPVLQILGAHGSNNDNQHNGGANLQHVIKGSVMITIGCFSWACFVILQAITLETYPAELSLTAWICLLGAAEGAIVALVMERDNPSIWSLHWDTKLLAAVYSGIVCSGLTYYIQGVVMKSRGPVFVTAFNPLCMVIVAVMGSFFLFEQIYLGRVIGAIVIVLGLYLVIWGKSKDYDSPTPVTKEQLSPAKLIPDESSARKDNSNHEVITITNSGAGIKRQDEQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2985 382 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Dere01g2985 382 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020
Dere01g2985 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Dere01g2985 382 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Dere01g2985 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2985 Dere-ChrDere01 44395013 44397014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2985 1 382 Nodulin-like Gene Family AT2G37460 62.597 4.29e-172 483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2985 01 44395013 44397014 Dere01g2985 01 44395013 44397014 ECH