Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2968 ATGTCTGAGCAAACGCCCAGACTCGAATCTTTCATTAAGAACAGATTGCTGTCAAGTGCTCGGTATGAATTAAAATTAGTAAGGCATGCCAACAGGCCAACAGGTACACCAGAGCACGCTCATTTTCTCAGTGCTTTAGTTGTCCGTGCCTCCCATTTTGTTTTTCTGATTTTAAAAGCGATCAGTGCCAACTTTGTTTCTTTGAACAAATTCGCTCTTTATATCTTCCTCTCTGTTTTATGCAGATTCTCTAGACTACCAATTCTTCTCCGTTATCAGTATCCAAAGATGAAAGGCATTGAAATCTTCTGTGCTTCCCAAGCCTCAACAGCCGTATGTCTTAGTATGGATGAAGCCTCCTCCTCCTCCTCTTCCTCTTCCAAAACCGTTCAACTTGGCGGCCGAGCCATCGATCGCCACAACCCCATTATCAGAGATTCAAGAAGAACCCCATGCGCTTCTCCTCCTCCTTCTTCTTCTTCTCCTAAGCCACCCATAGATCCAAAATGTAACCATCAACCCCAAAAGGCCAAGAAAAACTCTTCAACGAAGCCAAGTGACGAGAACAAGAGGAACTCACGGAAGGATCGTGATCAGAAGAAGAAAAGTGCTGCAGGAAGGCTGACTGAACATATCACAAACAGTTACTCTTCAAAGCCAATTGAGAGTGTTCTTCGGAGGAGTTGGGTTAGGCCACCTCCTGATTTAATCACTCCTCCAGGTTCATCTAGATATTTGCTTACTGAGACTTCCAGATTCGATGGCTTATCGGATTATGACCCAGCTTTGGCCTTAACTCCCTTTGATGACAATAACAAGAAGGCTCAAGCTGTTCATCAAGATCAAACCAACCATGCTTCCAAACCCTCTACCTCTTCTCTCCCAAGACCTGCTTCCTCAGACCAGGTAGTGGTATTGAGGGTTTCTCTGCACTGCAGAGGTTGTGAAGGAAAACTCAGGAAACACCTCTCCAGAATGGAAGGAGTTACTTCGTTCAACATAGACTTTGCAGCGAAAAAGGTGACAGTAGTTGGAGATGTGACTCCACTGAGTGTATTGGCAAGCGTATCAAAGGTGAAGAACGCACAATTTTGGCCAGTACCTGCAACACCAGCTGCCTCTGGTGTAGCTGAAAGTAAGAAATAA 1146 0.4485 MSEQTPRLESFIKNRLLSSARYELKLVRHANRPTGTPEHAHFLSALVVRASHFVFLILKAISANFVSLNKFALYIFLSVLCRFSRLPILLRYQYPKMKGIEIFCASQASTAVCLSMDEASSSSSSSSKTVQLGGRAIDRHNPIIRDSRRTPCASPPPSSSSPKPPIDPKCNHQPQKAKKNSSTKPSDENKRNSRKDRDQKKKSAAGRLTEHITNSYSSKPIESVLRRSWVRPPPDLITPPGSSRYLLTETSRFDGLSDYDPALALTPFDDNNKKAQAVHQDQTNHASKPSTSSLPRPASSDQVVVLRVSLHCRGCEGKLRKHLSRMEGVTSFNIDFAAKKVTVVGDVTPLSVLASVSKVKNAQFWPVPATPAASGVAESKK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2968 381 PANTHER OS08G0405700 PROTEIN 102 374 IPR044526 -
Dere01g2968 381 CDD HMA 305 358 IPR006121 GO:0046872
Dere01g2968 381 MobiDBLite consensus disorder prediction 274 299 - -
Dere01g2968 381 Gene3D - 299 363 - -
Dere01g2968 381 MobiDBLite consensus disorder prediction 277 299 - -
Dere01g2968 381 Pfam Heavy-metal-associated domain 306 357 IPR006121 GO:0046872
Dere01g2968 381 MobiDBLite consensus disorder prediction 155 169 - -
Dere01g2968 381 ProSiteProfiles Heavy-metal-associated domain profile. 301 367 IPR006121 GO:0046872
Dere01g2968 381 SUPERFAMILY HMA, heavy metal-associated domain 302 359 IPR036163 GO:0046872
Dere01g2968 381 MobiDBLite consensus disorder prediction 119 215 - -
Dere01g2968 381 MobiDBLite consensus disorder prediction 181 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2968 Dere-ChrDere01 44180624 44183193 Dispersed/Wgd