LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g2964	ATGAGGAGAAGCATCTGCTTTCACCCCAAGACGCAATCGTTCTCCATGTCCAATTCCAGTCCCTCGCAAATCACCTATTCAAGCTCATCGCGAGCGACGAGCTCTTCTGGATCGACCATAGACCAGTGCATCGAGGAAGCCCAAGCCTTGATACAGAAGTGGAACCCAGAAACCTCCCCTTACGCCAAAGTCACCTCCCTCTTCTTCGCCGACAAATCCGAGGCCATGCACTACATCAAATGCGTCAACCAACTCCACAAAGCAATGAATCTTCTAGTCTCCCACACCCCATTCTCCTCCCACAAGCTCAGTCTCGCTAACAGCTTGATGCAGGTGGCTATGAAGAGGCTCCAAAAAGAGTTCTATCAGATTCTATCCATCAATCGGGACTACTTAGACCCCGAATCAGTCTCCACCACTAGATCATCCGTCTCCCTCTGTTCCACCATTTCCGATTACGATGTCGACGATTTTACTGCACCCGACGACGACGTACGGGCGGCTGGTGATTGTATCTCTGAATTAGAACAAGTCTCTTCCGTCGCCATGAAGGATCTAAGTTCCATAGCTGAGTGTATGATCTCTTGCGGTTATGCCAAAGAATGTGTGGAAGTGTACAGAGTTATCCGAAAATCGATCATCGACGAAGGTATTTATCGCCTGAACTTGGAGAAATTGAGTACTTCTTACGTTAATAGGATGGATTGGCAAGTTCTTGAGTTGAAAATCAAGATTTGGTTGGAGGCAGTGAAGGTTGCAGTGAGGACGCTGTTCAACGGAGAGAGAATCCTTTGCGACAACGTCTTCGCCAGTTCAGATTCCATCAGAGAATGCTGCTTCGCCAATATTTCCAGAGACGGAGCCACTCTTCTATTCGCATTTCCCGAACTCGTCGTCTCCAAACTTAAAAAGTCGCCTCCGGAGAAGATGTTTTGGGTGCTTGACATTTACACTGTATTAACTGCTCTATTGCCGGAGATCCAATCCATTTTCTCTTTCAGTTCGACCTCTGAAATTACAAATCAAGTCCTCCACTCTCTACGCCGTCTCAGCGAATCCGTTCGAACAACGCTTTCAAATTTGGAGTCCGTGATTCAAAACGACTCATCCAAATCATCGGTAAAATCCGGCGGAGTACACCCGTTGACGGCACGAGTAATGGACTTCCTCTCTGTTCTCACAGACTACAGTAACGTACTCTCCGACATATTCGCCGACTGGTTTCCACCACCAAAGTCCCCGGTGCCCGAGTATTTTCTAGACAGTCCAGATTCCCATCAAACTTCGGCGGCTCCACCTTTCTCCGCGAGGATAGCATGGCTGATCCTCGTTCTTTTATGCAAGCTCGACCACAAAACGAAGCATTGCAAAGACGCTTCGTTGTCGTACCTGTTTCTCGCAAACAATCTCCAGCTCGTGATAGCCACAGCGCGAAACTCGAACTTGCAGTACGTGCTGGGCGACGAGTGGATGGCGAAGCACGAAGCGAAGATGAAAGGATACGTGACCAAGTACGAGAAGTTGGCGTGGGGGGAAGTGCTTTCGTGCTTGCCGGAAAATCCAAAAGCGACGATGTCGCAGGAAGAAGCGAGGGTCATATTCGCGCACTTCAACTTCCGTTTCGAGGAGTCATATCGGAAACAGAATTTATTCACGGTACCGGACCAGAAATTCCGGGACGAGATCAGAGGGTCAATAGCGAGAAAAATAGTGCCGATTTATCGTGAGTTTTATAATACACACAGGATGACTGTCGGAACAGTGCGAGAAATGACACAGTATGTCATATTTACCCCCGACGATGTGAAAAATTACCTGTCGAACCTGTTCATTGCGGGAAAGACCTCCGGCAGTGTAACGACATCTACGTCATCATCGTCTTCGGTAACGTCATCTCCTCAGCGACGGTAA	1911	0.484	MRRSICFHPKTQSFSMSNSSPSQITYSSSSRATSSSGSTIDQCIEEAQALIQKWNPETSPYAKVTSLFFADKSEAMHYIKCVNQLHKAMNLLVSHTPFSSHKLSLANSLMQVAMKRLQKEFYQILSINRDYLDPESVSTTRSSVSLCSTISDYDVDDFTAPDDDVRAAGDCISELEQVSSVAMKDLSSIAECMISCGYAKECVEVYRVIRKSIIDEGIYRLNLEKLSTSYVNRMDWQVLELKIKIWLEAVKVAVRTLFNGERILCDNVFASSDSIRECCFANISRDGATLLFAFPELVVSKLKKSPPEKMFWVLDIYTVLTALLPEIQSIFSFSSTSEITNQVLHSLRRLSESVRTTLSNLESVIQNDSSKSSVKSGGVHPLTARVMDFLSVLTDYSNVLSDIFADWFPPPKSPVPEYFLDSPDSHQTSAAPPFSARIAWLILVLLCKLDHKTKHCKDASLSYLFLANNLQLVIATARNSNLQYVLGDEWMAKHEAKMKGYVTKYEKLAWGEVLSCLPENPKATMSQEEARVIFAHFNFRFEESYRKQNLFTVPDQKFRDEIRGSIARKIVPIYREFYNTHRMTVGTVREMTQYVIFTPDDVKNYLSNLFIAGKTSGSVTTSTSSSSSVTSSPQRR	636

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g2964	636	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	32	610	IPR004140	GO:0000145\|GO:0006887
	Dere01g2964	636	Gene3D	Exocyst complex component Exo70	64	617	-	-
	Dere01g2964	636	Pfam	Exo70 exocyst complex subunit	246	607	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Dere01g2964	636	MobiDBLite	consensus disorder prediction	11	37	-	-
	Dere01g2964	636	MobiDBLite	consensus disorder prediction	616	636	-	-
	Dere01g2964	636	SUPERFAMILY	Cullin repeat-like	46	610	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g2964	Dere-ChrDere01	44158783	44160693	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g2964	38	610	EXO70 exocyst subunit family	AT3G09520	52.496	0.0	581