Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2944 ATGGTTAGATCTTGCTGGAAACCATCTGTAGAAGGTGAAGATGGAGACTTGAATGGGAGGGTTGATGGGTTGCTATGGTACAAGGATTTGGGGAACCATGTTTATGGGGAATTCTCGATGGCTGTAGTTCAGGCCAATAGTTCATTGGAGGATCGAAGCCAACTTGAATCTGGACCCTTCACTTCCAGCCATTTGGGTCCTCAAGGGACCTTCATAGGTGTCTATGATGGCCACGGTGGAACAGAGGCCTCGCAGTTTGTCTCTGACAATCTCTTCTTCAATCTCAAGAGGTTTGCAGGCGAAAGTCAAGGCATGTCAGAAGATGTTATCAGAAGTGCATTTTCTGCAACAGAGGGGGATTTCCTGTCTCTGGTGAAGAAACAGTGGCTAAATAGGCCACAAATTGCATCCACCGGGACATGTTGCTTGGCGGGGATAATTTGCGATGGCTTACTATATGTTGCAAACTCTGGGGATTCCCGCGTGGTGTTAGGAAGAGTAGAGAGAGCAACAAGAGAAATAGAGGCTATACAATTATCTGCAGAACACAATGTTAACATACAAACTGTGAGAGATGAACTTCGGTCCAAGCACCCTTATGATCCACAAATTGTGGTTGTTAAACATAATGTTTGGCGAGTGAAAGGCCTCATACAGGTTTCAAGATCCATCGGTGATGCATATCTGAAAAAGACAGAATTTAACAGAGAGCCTCTACCGTTGAAGTATAGATTGCCTGAACCCTTCTTTAAGCCAATTCTTAACTGTGATCCATCAATATCAACCCATAAACTCCAACCAGAGGATCAATTTCTCATTTTTGCTTCTGATGGACTATGGGAGCATCTTAGCAACCAAGAGGCTGTCAATATAGTCAGCAATTACCCACGTAATGGAATTGCGAGGAGGCTTGTAAAAGCTGCACTTCGAGAAGCAGCGAGGAAGAGAGAAATGAGATTCTCAGACCTGCAAAAGATAGAACAAGGTGTAAGGAGACACTTCCATGATGATATGACAGTACTAGTTGTATTCCTAAATCCCAAACTGACTGATAATAGCTCTCTTTGGGGCTCTCGTCTTTCAATTAGAGGTGGCGGCTCTGCAAACTTCTAG 1113 0.4412 MVRSCWKPSVEGEDGDLNGRVDGLLWYKDLGNHVYGEFSMAVVQANSSLEDRSQLESGPFTSSHLGPQGTFIGVYDGHGGTEASQFVSDNLFFNLKRFAGESQGMSEDVIRSAFSATEGDFLSLVKKQWLNRPQIASTGTCCLAGIICDGLLYVANSGDSRVVLGRVERATREIEAIQLSAEHNVNIQTVRDELRSKHPYDPQIVVVKHNVWRVKGLIQVSRSIGDAYLKKTEFNREPLPLKYRLPEPFFKPILNCDPSISTHKLQPEDQFLIFASDGLWEHLSNQEAVNIVSNYPRNGIARRLVKAALREAARKREMRFSDLQKIEQGVRRHFHDDMTVLVVFLNPKLTDNSSLWGSRLSIRGGGSANF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2944 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Dere01g2944 370 FunFam Phosphatase 2C family protein 26 355 - -
Dere01g2944 370 CDD PP2Cc 35 345 IPR001932 -
Dere01g2944 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Dere01g2944 370 Gene3D - 28 354 IPR036457 -
Dere01g2944 370 Pfam Protein phosphatase 2C 59 314 IPR001932 -
Dere01g2944 370 SMART PP2C_4 31 343 IPR001932 -
Dere01g2944 370 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Dere01g2944 370 PANTHER PROTEIN PHOSPHATASE 29 343 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2944 Dere-ChrDere01 44036465 44038065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2944 1 366 PP2C-type Phosphatase Gene Family AT3G12620 67.209 0.0 524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2944 01 44036465 44038065 Dere02g0953 02 9076310 9078335 CCT