Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2920 ATGACGGATCGCCTGGTGTCTCTCTACGTTTTCAGAAGGTACTATCTAGTGTGGCAGCATGGTTCGCGCCATTGCCCATGTTACACGTGGCGTATTTCTGTTCGCTGTTCAGTTTACTATCTTTTCTTTCGTCCCGAGGCCACGTCGAAGTGCAACTACCAACTACTGGCGAAAGCATGCGATCCTGGCCGCTCGGTAGAGAGCCTACATAACGCTAGAATCTTCGAGCGTGCCCGAGACACTTCCGATATATATATTGGTTCTTTTCAAGTCGTACAGTTGCTTGTTGCTCAGTTCGTGCGGTACCGCTCTCTGCTTTTCTGTGAATCCAAAGTTTCAGAATCCGCAGTTACCATGGGGAAGAGCTACCCGGCTGTTAGCGAGGAGTATCAGAAATCTATTGAGAAGTGCAAGAAGAAGCTCAGAGGGCTCATTCAAGAGAAGCATTGTGCTCCCATCATGCTCCGATTGGCGTATGAATTTTCTATCAGTTGTGTATGGCACTCAGCTGGGACCTTCGATGTGAAGACGAAGACAGGAGGACCATTTGGTACTATAAGGCACCCAGCAGAGCTCGCCCATGGAGCAAACAATGGCCTTGACATTGCAGTCAGGCTTCTGGAACCGATCAAGGAGCAGTTTCCGTTAATATCTTACGCTGACTTGTATCAGTTGGCTGGAGTCGTGGCGGTGGAAGTTACAGGAGGACCCGAGATTCCCTTCCACCCTGGGAGAACGGACAAAACTGAACCACCTCCAGAAGGTCGCTTACCAGATGCCAATAAAGGTTCGGATCATTTAAGAGATGTCTTTGGCCACATGGGTCTGTCTGATAAAGATATAGTTGCCTTATCCGGTGGTCACACGCTGGGAAGGTGCCACAAGGAACGCTCTGGATTTGAGGGACCTTGGACACAAAACCCTCTCGTTTTTGATAACTCTTATTTCAAGGAACTTCTCAGTGGAGAGAAAGAAGGTTTGATCCAGCTGCCATCAGACAAGGCTCTTCTAAGTGATCCAGTGTTCCGTCCTCTTGTTGAAAAATATGCCGCTGATGAGGATGCCTTCTTTGCGGACTATGCTGAAGCTCACCTGAAGCTTTCAGAACTTGGATTTGCAGATACAGAGTAA 1131 0.4845 MTDRLVSLYVFRRYYLVWQHGSRHCPCYTWRISVRCSVYYLFFRPEATSKCNYQLLAKACDPGRSVESLHNARIFERARDTSDIYIGSFQVVQLLVAQFVRYRSLLFCESKVSESAVTMGKSYPAVSEEYQKSIEKCKKKLRGLIQEKHCAPIMLRLAYEFSISCVWHSAGTFDVKTKTGGPFGTIRHPAELAHGANNGLDIAVRLLEPIKEQFPLISYADLYQLAGVVAVEVTGGPEIPFHPGRTDKTEPPPEGRLPDANKGSDHLRDVFGHMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTQNPLVFDNSYFKELLSGEKEGLIQLPSDKALLSDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFADTE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2920 376 Pfam Peroxidase 140 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 CDD ascorbate_peroxidase 123 372 - -
Dere01g2920 376 Gene3D Peroxidase, domain 2 258 364 - -
Dere01g2920 376 MobiDBLite consensus disorder prediction 239 264 - -
Dere01g2920 376 SUPERFAMILY Heme-dependent peroxidases 123 371 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Haem peroxidase superfamily signature 280 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Haem peroxidase superfamily signature 235 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Haem peroxidase superfamily signature 217 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Haem peroxidase superfamily signature 304 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 Coils Coil 127 147 - -
Dere01g2920 376 ProSitePatterns Peroxidases proximal heme-ligand signature. 280 290 IPR019793 -
Dere01g2920 376 PRINTS Plant ascorbate peroxidase signature 274 295 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Plant ascorbate peroxidase signature 130 150 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Plant ascorbate peroxidase signature 256 273 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Plant ascorbate peroxidase signature 348 372 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PRINTS Plant ascorbate peroxidase signature 296 320 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 ProSiteProfiles Plant heme peroxidase family profile. 200 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2920 376 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 119 371 IPR044831 GO:0004601|GO:0034599
Dere01g2920 376 Gene3D - 138 371 - -
Dere01g2920 376 FunFam L-ascorbate peroxidase, cytosolic 258 364 - -
Dere01g2920 376 MobiDBLite consensus disorder prediction 243 264 - -
Dere01g2920 376 FunFam Cytosolic ascorbate peroxidase 137 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2920 Dere-ChrDere01 43891544 43895248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2920 198 371 Peroxidase AT4G17690 33.019 1.28e-19 87.0