Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2919 ATGGAGGGTAGGCTTCTGCTTCTATCCTCTCTTCTATTCGTACTCCTACTCCTCTCTCACTTTTCCTCTGCTCAAAACCCAGGTTTTGTAAGTTTGGACTGCGGAGGTAAAGAAAATTTCACTGATGGACTTGGTCTTGATTGGACTCCTGATGATAAACTTACTTATGGGGAAACAAGCACTATATCAGTTGCAAATGAGACCCGGAAGCAGTACACAACACTACGTCATTTTCCTGCTGATTCTCGAAAATACTGTTACACGCTTAATGTTGTCAGTAGGACGAGATACCTACTGAGGGCGACATTCTTGTATGGGAACTTTGATAATAACAATGTTTATCCTAAATTTGACCTTTCCTTCGGGGCTACTCATTGGTATACAATTGTTATATCTGATGCTAATACTATAGAGATGCGTGAGCTTATATTTCTGGCTACAAGTTCTACAGTAAGTGTATGTTTATCAAATGCAACAACTGGGCAACCATTCATATCCACACTTGAGCTCCGACAATTCAATGGTTCAGTTTATTATACGCAGTTTGAAGAACAATTTTACCTAAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCGATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCAGATTCTGTGAAGAAAGCTAATTATCTTGTTGATGTTGCTGCCGGAACCGAGAAAATTTCTACCAATTTACCAATTGATGTTAAAAGTGATGAAATGCCACCTGAGAAAGTAATGCAGACAGCTGTAGTAGGCACAAATGGATCCCTAACTTACCGGTTGAACTTGGAAGGTTTTCCAGGAACTGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGACTTAGGTCCAGATGAATCCAGAAAATTCAGGCTAGTTCTTCCAGGCCAACCTGATATCAGCAAGGCTGTTGTTAATATTGAAGAAAATGCTCAAGGAAAATATCGTCTGTATGAACCAGGATTTACCAATTTATCCCTACCCTTTGTGCTATCCTTTAGATTTGGCAAGACATCTGATTCTTCCAGGGGCCCTCTTCTCAATGCTTTGGAGATAAATAAGTATCTAGAGAAAAATGATGGCTCTTTAGATGGAGCTGCTATTTCTGATATACTTTCACATTACTCCTTAGCAGACTGGGCGCAAGAAGGTGGTGACCCATGTCTACCTGTTCCTTGGTCATGGGTCCACTGTAGCTCAGATCCACAACCAAGAATAGTTTCAATTTTGTTATCCAGTAAAAACTTGACTGGGAATATTCCTTCTGACATCGCCAAATTGACTGGTCTCGTTGAACTATGGCTTGATGGAAATATGTTGACCGGATCAATACCTGATTTTAGTGGATGCATGGATTTGAAGATTATTCATCTTGAGAACAATCAGTTGACTGGTGAGATACCTTCCTCTCTGGCGAACCTCCCAAATTTGAGGGAACTCTATGTGCAAAATAATATGTTATCTGGAACAGTGCCTTCAGGTCTTTTGAGCAAAGATATGGTGTTGAACTACTCTGGGAACATTAATCTTCATAAAGGAAGCAAAAAGAAGAGCCACATATTTGTTATGATTGGTTCATCAATTGGGGCTGCTGTTCTACTGTTAGCTACAATTGCTTCTTGCCTTTTTATGCGCAAAGGAACGAGAGGATATTATGAGGAAGATCCCCTTACTTGCCTCTCTTCACAAAGGCTGGCTTTTTCCAAGAGTGATGCTCCTGCAGAAGCTGCTCGCTGCTTCAGTTTTTCTGAAATTGAAAATGCCACAAATAACTTTGAGAAGAAGATTGGTGCTGGAGGTTTTGGAGTTGTATACTATGGGATGCTGAAAGATGAAAAAGAGATTGCCGTTAAAGTTCTAACCAGTAATTCCTATCAGGGAAAGCGAGAGTTTTCCAATGAGGTGACTCTTCTTTCAAGGATACATCACAGAAACTTGGTACAACTTCTTGGGTACTGCCGAGATGAAGGCCACAGTATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGTCCATTGACGCGTGGGCAGAGTATCAATTGGATTAAGCGCCTCCAAATTGCGGAAGATGCTGCCAAAGGGATTGAATATCTACACACAGGCTGTGTTCCTGCTGTTATTCATAGAGACTTAAAAAGCAGCAATATTCTTCTTGACAGACACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCTAAACTCGCAGTAGATGGAGCCTCCCATGTTTCAAGTATAGTTCGGGGCACAGTCGGGTATTTGGATCCAGAGTACTACATTTCCCAGCAGCTGACCGACAAGAGTGATGTTTATAGTTTTGGTGTCATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTGCAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGCGGAGATATACAAGGTATTATTGATCCCTCTCTGCGAAATGACTATGACCTGCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGACATATGAGGCCATCGATTTCTGAAGTTCTTAAGGAGATCCAAGATGCAATCTCTATAGAGAGGGAGGCCAAAACAGTAAGGGAAGGCAATTCTGATGAAATGTCAAGACAATCTGTTCATTCTTCCATGAACATGGGATCCATGGACCTGTGTGGAACTGAGAATTACTTGTCTATTGATGAATCCATTGCACAGCCCACTGCAAGATAG 2784 0.4091 MEGRLLLLSSLLFVLLLLSHFSSAQNPGFVSLDCGGKENFTDGLGLDWTPDDKLTYGETSTISVANETRKQYTTLRHFPADSRKYCYTLNVVSRTRYLLRATFLYGNFDNNNVYPKFDLSFGATHWYTIVISDANTIEMRELIFLATSSTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTNLPIDVKSDEMPPEKVMQTAVVGTNGSLTYRLNLEGFPGTGWAFTYFAEIEDLGPDESRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSSRGPLLNALEINKYLEKNDGSLDGAAISDILSHYSLADWAQEGGDPCLPVPWSWVHCSSDPQPRIVSILLSSKNLTGNIPSDIAKLTGLVELWLDGNMLTGSIPDFSGCMDLKIIHLENNQLTGEIPSSLANLPNLRELYVQNNMLSGTVPSGLLSKDMVLNYSGNINLHKGSKKKSHIFVMIGSSIGAAVLLLATIASCLFMRKGTRGYYEEDPLTCLSSQRLAFSKSDAPAEAARCFSFSEIENATNNFEKKIGAGGFGVVYYGMLKDEKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEGHSMLIYEFMHNGTLKEHLYGPLTRGQSINWIKRLQIAEDAAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGANCRNIVQWAKLHIESGDIQGIIDPSLRNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIEREAKTVREGNSDEMSRQSVHSSMNMGSMDLCGTENYLSIDESIAQPTAR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2919 927 Pfam Protein tyrosine and serine/threonine kinase 601 866 IPR001245 GO:0004672|GO:0006468
Dere01g2919 927 CDD STKc_IRAK 605 872 - -
Dere01g2919 927 Gene3D Phosphorylase Kinase; domain 1 574 674 - -
Dere01g2919 927 Gene3D Transferase(Phosphotransferase) domain 1 675 899 - -
Dere01g2919 927 ProSiteProfiles Protein kinase domain profile. 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2919 927 FunFam Leucine-rich repeat receptor-like protein kinase 577 674 - -
Dere01g2919 927 SMART serkin_6 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2919 927 Gene3D Ribonuclease Inhibitor 375 529 IPR032675 -
Dere01g2919 927 Pfam Malectin-like domain 32 362 IPR024788 -
Dere01g2919 927 PANTHER OS07G0107800 PROTEIN-RELATED 462 875 - -
Dere01g2919 927 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Dere01g2919 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Dere01g2919 927 SUPERFAMILY L domain-like 400 515 - -
Dere01g2919 927 SUPERFAMILY Protein kinase-like (PK-like) 584 869 IPR011009 -
Dere01g2919 927 FunFam Leucine-rich repeat protein kinase family protein 374 525 - -
Dere01g2919 927 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 675 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2919 Dere-ChrDere01 43870151 43875985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2919 22 709 Receptor kinase-like Gene Family AT2G37050 69.341 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere01g2919 Malectin_like 3.4e-78 CL0202