Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2899 ATGGGACTGGACCCTTCCGAAGCGGGTGGATCTGTTCGATTCTGCGTGGTAGCCATGGCCGATGACTTTGAGTTTGCGGATAAAGTCCCTCCTTCTTTCGATCGCGTGGGAGATATGATAAAAAATTCCGAAGCCAAAGGGATCAATCCAGGGTTAATAGTTCTCCTGGTCGTTGGTGGGCTGCTATTGTCATTCCTCGTTGGAAATTATGTCCTTTACATGTATGCACAGAAGACCCTCCCTCCTAGGAAAAAGAAGCCAGTCTCAAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGCGTCTCTGCACCTGGAGAGTAG 324 0.4877 MGLDPSEAGGSVRFCVVAMADDFEFADKVPPSFDRVGDMIKNSEAKGINPGLIVLLVVGGLLLSFLVGNYVLYMYAQKTLPPRKKKPVSKKKMKRERLKQGVSAPGE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2899 107 PANTHER DNA-BINDING PROTEIN S1FA2 19 107 IPR006779 GO:0003677|GO:0005634|GO:0006355
Dere01g2899 107 MobiDBLite consensus disorder prediction 81 107 - -
Dere01g2899 107 Pfam DNA binding protein S1FA 43 107 IPR006779 GO:0003677|GO:0005634|GO:0006355
Dere01g2899 107 MobiDBLite consensus disorder prediction 83 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2899 Dere-ChrDere01 43711323 43713808 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Dere01g2899 S1FA 5e-41 No_clan