Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2898 ATGTTGGTACTTTCTTGCATATTCTCCGCCACCGTCTTTATCTCCTTCGCGCTGTTTCTCTGCTTCTCCTGCAGCGTCCTTACTATCGCCGCCACTGAATTCGACTTTGGCACCTTGACTTTAAACAGTCTCAAGCTTCTTGGAGATGCTCACTTGAACAATGTCAGTGTCAGGCTCACCAGGGACCTCGCCGTTCCCAACTCCGGTGCCGGCAGAGTGCTCTACTCCAAACCCATCAGGTTCCGCCAACCCGGCACTCACTCTCCGGCCAGTTTTCAGACCTATTTCTCTTTTTCAATTACCAATCTGAATCCATCGTCCATTGGCGGGGGACTCGCTTTTGTGATTTCGCCGGATGATGAGACCATCGGTGACGCCGGCGGCTTCCTGGGCCTCCTCAAAGCGGACGGCTCTGCCTCGGGTTTTCTGGCGGTGGAATTCGATACTCTCATGGATGTAGAGTTCAAGGACATTAACGGAAATCATGTAGGGCTGGACCAGAGTAGTATGGTCTCAACGCATGTTGGTGACCTGGAATCCGTTGGGATTGATCTAAAAAGTGGCGATCTTGTGAACGCGTGGATCGAGTACAACGGCTCAACCAAGGGCTTTAACATCTGGGTTTCCTACTCAAATCTAAGACCCAAAGATCCCCTTCTCTCATTCGATCTTGATCTGGATCAGTACGTAAATGACTTGATGTACGTGGGTTTCTCTGGCTCGACGCAGGGAAGCACAGAGGTCCACAGCATAGAGTGGTGGAGCTTTAGCTCTTCCTTCGATTCCAATTCGCCATCTGGATCAGGGTCATCAGCGGCGCCGCCGCCTCCAGCTCTTAGTTTGATGAACTCAACTGCCAGTTCCGTCAAGTCGCCACCTCCTTCTTTGGCTCCTTCAGGCTCACATACTCAAGAAAAGGATGGTAAATCGTCCTGCCACAATGAGCTCTGTAAGCAAAATCCGGGAGCCGTTGCGGGGGTTGTGACGGCAGGGGCTTTTGTTCTAGCTTTGTTCGCGGGTGCATTCATTTGGGTATACTCCAAAAAGATCAAACAAGTTAAGAAATCCAAGTCACTTGCCTCAGAAATTATCAAAATGCCTAGAGAGTTCAGTTATAAGGAGCTCAAAACAGCCACCAAGTGCTTCAATGCCAACAGAATAATTGGTCACGGCGCATTTGGAACGGTTTATAAGGGTATATTACCAGAGAACGGTGATATCGTTGCGGTGAAGAGATGCAGCCATAGCAGTCAGGGGAAGAACGAATTCTTATCTGAGTTATCCATAATCGGGTCTCTTAGACATCGAAATCTAGTTCGTCTTCAAGGCTGGTGCCACGAGAAAGGTGAAATTTTATTAGTCTATGACTTAATGCCCAATGGGAGTCTAGATAAAGCATTATTTGAGACCAGAACACCTCTGCCATGGCCTCACAGGCGCAAAATTTTGGTAGGCGTTGCCTCTGCCCTCGCATATTTGCATCATGAGTGCGAAAACCAGGTCATTCACAGAGACATTAAGACTAGTAACATAATGTTAGACGAAGGCTTCAATGCCCGGTTGGGTGATTTTGGTTTAGCTCGTCAAACAGAACACGACAAGTCCCCGGATGCCACGGTGGCCGCCGGAACAATGGGGTATCTGGCACCGGAGTATCTCCTCACAGGTAGAGCCACAGAGAAAACCGATATATTCAGTTATGGTGCGGTAGTTCTTGAGGTGGCCTGTGGGAGAAGACCTATAGAGAAAGATGCCACTGGGGCTGGTAAAGCAGGGGTAAGCAGTAACTTGGTAGAGTGGGTTTGGAGTTTGCACAGAGAAGGAAGATTGCTAATGGCGGCTGATGCGAGACTTCGTGGTGAGTTTGACGAAGGGGAAATGAGGAGAGTATTATTAGTTGGGCTTGCCTGCTCTCACCCCGACCCCTATTCGAGGCCCACAATGAGGGGTGTGGTTCAGATTCTGGTGGGTGAAGCTGAAGTCCCCATTGTCCCAATAACTAAGCCATCCACCAGTTATAGTACATCCCACCTCTTAATGTGTTTGCAAGACAGTGTCTCCGACTGCAATGGTATAATCTCCATCTCTACTTCCTCATCAGGGAACAGCTTTAACGGTGGAGATATCGTCTGA 2133 0.4909 MLVLSCIFSATVFISFALFLCFSCSVLTIAATEFDFGTLTLNSLKLLGDAHLNNVSVRLTRDLAVPNSGAGRVLYSKPIRFRQPGTHSPASFQTYFSFSITNLNPSSIGGGLAFVISPDDETIGDAGGFLGLLKADGSASGFLAVEFDTLMDVEFKDINGNHVGLDQSSMVSTHVGDLESVGIDLKSGDLVNAWIEYNGSTKGFNIWVSYSNLRPKDPLLSFDLDLDQYVNDLMYVGFSGSTQGSTEVHSIEWWSFSSSFDSNSPSGSGSSAAPPPPALSLMNSTASSVKSPPPSLAPSGSHTQEKDGKSSCHNELCKQNPGAVAGVVTAGAFVLALFAGAFIWVYSKKIKQVKKSKSLASEIIKMPREFSYKELKTATKCFNANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFETRTPLPWPHRRKILVGVASALAYLHHECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDIFSYGAVVLEVACGRRPIEKDATGAGKAGVSSNLVEWVWSLHREGRLLMAADARLRGEFDEGEMRRVLLVGLACSHPDPYSRPTMRGVVQILVGEAEVPIVPITKPSTSYSTSHLLMCLQDSVSDCNGIISISTSSSGNSFNGGDIV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2898 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Dere01g2898 710 FunFam L-type lectin-domain containing receptor kinase VIII.1 458 673 - -
Dere01g2898 710 Gene3D - 30 272 - -
Dere01g2898 710 CDD STKc_IRAK 388 655 - -
Dere01g2898 710 ProSitePatterns Protein kinases ATP-binding region signature. 388 411 IPR017441 GO:0005524
Dere01g2898 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 262 IPR013320 -
Dere01g2898 710 MobiDBLite consensus disorder prediction 265 314 - -
Dere01g2898 710 FunFam L-type lectin-domain containing receptor kinase VIII.1 346 457 - -
Dere01g2898 710 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 270 - -
Dere01g2898 710 Pfam Protein kinase domain 383 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2898 710 CDD lectin_legume_LecRK_Arcelin_ConA 32 254 IPR001220 GO:0030246
Dere01g2898 710 SUPERFAMILY Protein kinase-like (PK-like) 364 687 IPR011009 -
Dere01g2898 710 SMART serkin_6 382 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2898 710 MobiDBLite consensus disorder prediction 277 305 - -
Dere01g2898 710 Gene3D Transferase(Phosphotransferase) domain 1 458 661 - -
Dere01g2898 710 PANTHER - 54 665 - -
Dere01g2898 710 Gene3D Phosphorylase Kinase; domain 1 343 457 - -
Dere01g2898 710 Pfam Legume lectin domain 32 263 IPR001220 GO:0030246
Dere01g2898 710 ProSiteProfiles Protein kinase domain profile. 382 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2898 Dere-ChrDere01 43696076 43698208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2898 11 692 Receptor kinase-like Gene Family AT3G53380 71.326 0.0 958
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere01g2898 Pkinase 1.1e-50 CL0016