Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2879 ATGTCAACCTACGTAATGCTAATGGCATCCAATAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCAGAACAAGAAGCACAGCAGATTGTGAATGCGGCCAAAAATGAAAAATTGGCTAGACTGAAGCAGGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGAATATCGAGCACAGGTGGAGTATGAGTTCCAAAAGAAATTGGCAGAGAGTAGCGGAGATTCTGGTGCTAATGTGAAGCGGCTTGAGCAAGAGACTGAAGCAAAGATCCATCACCTGAAGAGAGGGGCCGAGAGAATATCTCAGGATGTTGTTACCATGCTCCTCAAGCATGTAACTACTGTGAAAAATTAA 354 0.4463 MSTYVMLMASNRGQGGIQQLLAAEQEAQQIVNAAKNEKLARLKQAKEEAEKEIAEYRAQVEYEFQKKLAESSGDSGANVKRLEQETEAKIHHLKRGAERISQDVVTMLLKHVTTVKN 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2879 117 FunFam V-type proton ATPase subunit G 10 117 - -
Dere01g2879 117 Coils Coil 17 66 - -
Dere01g2879 117 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 8 117 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dere01g2879 117 Pfam Vacuolar (H+)-ATPase G subunit 14 116 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dere01g2879 117 Gene3D - 8 117 - -
Dere01g2879 117 NCBIfam V-type ATPase subunit G 13 116 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2879 Dere-ChrDere01 43593932 43595009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2879 8 117 Primary Pumps ATPases(2) AT3G01390 78.182 6.86e-47 145