Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2857 ATGAAGAGAAAGTTTCTGAGAGGGTGCCTTAACAAGTGGAAGAAAATGAGGAGTCAAGTCATACCATGTTCTGCCTGTGAGTATTGCTGTCAATGGCCTTTATGGTCTTCCACACAAGAAAGAAGATCCATCCCAAGTGATGTCCCAAAGGGTCATCTTGTTGTCTATGTAGGCGAGAATTGCAAGAGATTTGTTATCAAGGTCACATTACTAAATCATCCACTCTTCAAGGCATTGCTGGATCAAGCTCGGGAAGAGTATGATTTTGTTTCAGATTCAAAACTGTGCATCCCTTGCGACGAGCATCTTTTCCTCACTGTCCTTCGCTGTGCTAGCTCTCCACAGAGCAAAGGGCGTGAGAACTATCGCGTACCAGAAGTCCCTGATATGCCGTCTATTCCAAAACTATCCGTCATCAAACTAGATTTCTGA 432 0.4398 MKRKFLRGCLNKWKKMRSQVIPCSACEYCCQWPLWSSTQERRSIPSDVPKGHLVVYVGENCKRFVIKVTLLNHPLFKALLDQAREEYDFVSDSKLCIPCDEHLFLTVLRCASSPQSKGRENYRVPEVPDMPSIPKLSVIKLDF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2857 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 106 IPR003676 GO:0009733
Dere01g2857 143 Pfam Auxin responsive protein 25 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2857 Dere-ChrDere01 43361370 43362759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2857 31 121 Calmodulin-binding Proteins AT4G34750 46.875 2.21e-21 82.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2857 01 43361370 43362759 Dere01g2857 01 43361370 43362759 ECH