Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2851 ATGCAGATCAATCCTTTTGCAATGAAGTGTTTTCCATTCCACTATCGAGAGAAGAAGGAAGAGCAGACAAGCATGGAGTTAGCTTCAGGTCGGTCCAGCACTTCCATAAACGCTGAAGATGATGTGAGAAGATCTGCCTCTGAATTGAATTCTAAGGATGCTTCAGAAAATAGCACAGACTCCGTTAGGAGGACTGCATTACCCAGTTTGTCTCAAAGGCCCAGCAACCTGAGAGTGTTTACTGTTTCTGATCTAAAATCAGCCACAAAGAACTTCAGTCGCTCTGTTATGCTTGGAGAGGGAGGGTTTGGGTGTGTATACAAGGGATTAATCAAGAGTGCAGAGGATCCTAACAGGAAAATTGAAGTTGCGGTTAAACAACTTGGTAAACGAGGAATGCAGGGGCATAAGGAGTGGGTGACAGAAGTTAATGTTCTGGGCATCGTCGAGCATCCAAATCTTGTGAAACTAGTAGGTTACTGTGCAGATGATGACGAAAGAGGAATCCAGCGGCTTCTAATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCCCGGTCAGAGACTCCTCTCCCATGGAGTAAGAGATTGAAAATAGCTGAAGATGCAGCTCGTGGCTTAGCATACCTGCATGAGGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCAAATATTCTTCTGGACGAGCATTGGAATGCAAAGCTATCAGACTTTGGGTTAGCAAGATTGGGCCCACCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTGGGAACAATGGGGTATGCGGCTCCTGAATATGTTCAAACTGGACGTCTCACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCAGGCGCCCTTTTGATCGAAATCGTCCAAAGCGTGAGCAGAAGCTCTTGGAATGGGTGAGGCCATACCTATCAGATGGGAAGAAATTCCAACTAATATTGGATCCGAGGCTTGAAAGGAAACCCCTTGTCAAGTCAGCTCAAAGACTTGCTATAATAGCTAACCGATGCTTGGTGAAAAATCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGTGGAATCTTCATTGAATGCAAGTCCACAGCTACCTCTAAGGAATTTGGCATCAGCGGAAGCCTCCCAAGACACCAAATTAAAGAACAAGAGAAGGATTATGGATATGAAACCTGGAGAAAGTAATTGGTTTTTTAGGATATGGAGACCAAAACATCAAAAAGCAAGTTGA 1299 0.4342 MQINPFAMKCFPFHYREKKEEQTSMELASGRSSTSINAEDDVRRSASELNSKDASENSTDSVRRTALPSLSQRPSNLRVFTVSDLKSATKNFSRSVMLGEGGFGCVYKGLIKSAEDPNRKIEVAVKQLGKRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSETPLPWSKRLKIAEDAARGLAYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKREQKLLEWVRPYLSDGKKFQLILDPRLERKPLVKSAQRLAIIANRCLVKNPKNRPKMSEVLDMVNQIVESSLNASPQLPLRNLASAEASQDTKLKNKRRIMDMKPGESNWFFRIWRPKHQKAS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2851 432 SUPERFAMILY Protein kinase-like (PK-like) 68 373 IPR011009 -
Dere01g2851 432 ProSiteProfiles Protein kinase domain profile. 92 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2851 432 Gene3D Transferase(Phosphotransferase) domain 1 178 388 - -
Dere01g2851 432 Gene3D Phosphorylase Kinase; domain 1 72 177 - -
Dere01g2851 432 CDD STKc_IRAK 98 376 - -
Dere01g2851 432 MobiDBLite consensus disorder prediction 21 68 - -
Dere01g2851 432 PANTHER OS01G0588500 PROTEIN-RELATED 52 376 - -
Dere01g2851 432 FunFam Serine/threonine-protein kinase PCRK2 178 386 - -
Dere01g2851 432 ProSitePatterns Protein kinases ATP-binding region signature. 98 126 IPR017441 GO:0005524
Dere01g2851 432 MobiDBLite consensus disorder prediction 51 68 - -
Dere01g2851 432 FunFam Serine/threonine-protein kinase BIK1 58 177 - -
Dere01g2851 432 Pfam Protein kinase domain 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2851 Dere-ChrDere01 43321686 43324195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2851 8 370 Glycoside Hydrolase AT3G07070 42.234 8.85e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere01g2851 Pkinase 2e-48 CL0016