Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2849 ATGAGCTCCGAAGTGGTCCTCCAGAGATTCCCCCAGTCCGACCCAAAAGCTAACACAGGGCCACCCACCACGGCAGACTCCAACTCCAATGTACAACTCTCCCACCCTCGAAAATCTACCGCATTGTCTTCCTCTCGCTCCACCAAAGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGTGTCCGTATGCCGCCTCTCTGTGCCGCTCGAATATTCCAACTCACCCGAGAACTTGGCCACCGCTCCGACGGCGAGACCATAGAGTGGCTGCTACGCCAGGCCGAGCCATCTATCATCGCCGCTACCGGCTCCGGAACAGTCCCCGCCGCACCGGTTTCTACCAGCAACGCCGCTATCTCCTCCTCGGCAGCCTCTGTTCCTTGCCGGGTCCACTCCGTTTCGGCTGGTGGCAGTGGGCAGGGGATGTTCGCAATGGCTTTGCCGCAGCAGCAGCAGCAGCCGCAGCCGAGTTGTCGATTAGACTTGTGTCAGCCAATCGGGATGGAGTACGCTGCGGCTGCAGCGGCGGCGGCGGCTAACGGGTACAGGAATATGCCGTTCACCGCCTTGTTGTTGCAACCTTCAACGGAGGAGGCGGAGGATACTCAGCAAGATGAGACTCTCAGAGAACAATAG 639 0.6056 MSSEVVLQRFPQSDPKANTGPPTTADSNSNVQLSHPRKSTALSSSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSGTVPAAPVSTSNAAISSSAASVPCRVHSVSAGGSGQGMFAMALPQQQQQPQPSCRLDLCQPIGMEYAAAAAAAAANGYRNMPFTALLLQPSTEEAEDTQQDETLREQ 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2849 212 MobiDBLite consensus disorder prediction 1 58 - -
Dere01g2849 212 MobiDBLite consensus disorder prediction 1 43 - -
Dere01g2849 212 Pfam TCP family transcription factor 47 150 IPR017887 -
Dere01g2849 212 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
Dere01g2849 212 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 139 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2849 Dere-ChrDere01 43309051 43309689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2849 48 200 TCP Transcription Factor Family AT2G37000 56.774 1.48e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere01g2849 TCP 3.7e-30 No_clan