Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2839 ATGATTCGATCATTGGTTGGGAGAATACAAAAGCGTCTGTCTCTGATCGTGGGCAGATGGAAACTGGAAGCAGCAAATGTAGCAGTGCCAGATGATGTTATGGATGGACAATTTGCAGTTGTTGCAACCGAGGGAGAAGAAGCAAAGAGGTTTATCCTTGAACTGGACTACTTGACTGATCCTGCATTCTTGTCGCTGCTAGACCGGGCTCAGGAAAAGTATGGTTTTAGACACAAAGGAGCGCTTACAGTCCCTTGCAGCCCTCAAGAGTTACAAAAGATACAAAATCGCAGGAGAAACTCACTCTCATAG 312 0.4551 MIRSLVGRIQKRLSLIVGRWKLEAANVAVPDDVMDGQFAVVATEGEEAKRFILELDYLTDPAFLSLLDRAQEKYGFRHKGALTVPCSPQELQKIQNRRRNSLS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2839 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 93 IPR003676 GO:0009733
Dere01g2839 103 Pfam Auxin responsive protein 27 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2839 Dere-ChrDere01 43234769 43235080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2839 30 103 Calmodulin-binding Proteins AT3G43120 39.744 7.51e-13 59.3