Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2791 ATGATAATGCAGACAGTTCTTTTGGTAAGTTATAAATTGTTTCTTGGCTGGCCCTTAGCTGAGTCACCTTGTATCATTACCTCAGGTGGGAAGTCTTACATATTCAGGGACACAGCAAGCAGGGTGGATTTTGTAGGCTCAAAAAGGGTTAAAGCAGATGATGCTGTTCTTCTCATTTGGTACCAAGTGGTCACAAGCTGATGTATGTTGTTCTGCTTGCAGCTGCAGCTCATGCTTATCCATTCACTATCTTCTACAATCCTAGGGCATGCCCTTCAGAATGTAATTCTGTTAGCAAAATACGGAAAAGCTGTATATGGGACCCAGCTTTCAGTTGGGATGAGATTTAATATGATGTTTGAGAATGAGGAATTGAGTAAGTGCAGATATATGGGTGCAATATTTGGCGTGCAGAAAATGAGTGGGGAACTTCCTTGGAAGAAGATCTTATATGCCTGTTCCAGAAAATGGAAACCTGGAGCTGTCAAACTCTATCCTGGAAAATTGCATGCTCTGGGCCACACTAATAATCCTCCATCGTCTGCAACAATTACTGATAAGTCAAAATCGGAATCTGAGGTCTTAATTGATCATCTAGACATTGATGAATGGATGGTGTATTCTTCTTACCAACCTTGCAATGGACTTTTATCAGCTTCTTTACTAGTCTGTACTTCTCCCTCAAGCAAGTCTGTACTTCTCCCTCAAGCAGCTAATGATACCACTTTATCTTCAATGAGCCGAGAAATATGGGATCTTTTTGTGATGAATTTGAAGATCTCACCTCAATCAGACCAGCTATTGCCTGTGTTTCAAAAAGGGGATATAGCCAAGTTGGGGTGTACAGTAGTGTCAAGAACAAGGAATGGAACATGAATTGCCCGAAGGAAATTGGTTTTGTTGCTCAGATTGCGACAGAATACATTCTACATTGCAGAAGCTCCTGATGGTGACTTCTTAATGGCAAAATTGCGCCTCCTGAACGTGTACAACCTAGTGCTACTAGCTGCTGAAGAAGCAGACTCTATATGGACAGATAAATTTGGGTTCAACAGTATGAAACCAGAGCAGACTAGCAATTATGGAAAGAACTGCAGTCAGATGGTGACAATCAAAGGACTATCCATGCTTCAAAAAATGGTTCCTCCACGTCGACTCATCAATATGAAAGGAGAAAACCCCTTACTTTCTCGTTTTGTTTCCTTTCCTGCTGCCCTGGTCTTCTGTATTCTTTTGTTTGAAGGCATTCTGGAACCCGTAAATGCCATTTGTCTAAGCAATTAG 1284 0.4128 MIMQTVLLVSYKLFLGWPLAESPCIITSGGKSYIFRDTASRVDFVGSKRVKADDAVLLIWYQVVTSXCMLFCLQLQLMLIHSLSSTILGHALQNVILLAKYGKAVYGTQLSVGMRFNMMFENEELSKCRYMGAIFGVQKMSGELPWKKILYACSRKWKPGAVKLYPGKLHALGHTNNPPSSATITDKSKSESEVLIDHLDIDEWMVYSSYQPCNGLLSASLLVCTSPSSKSVLLPQAANDTTLSSMSREIWDLFVMNLKISPQSDQLLPVFQKGDIAKLGCTVVSRTRNGTXIARRKLVLLLRLRQNTFYIAEAPDGDFLMAKLRLLNVYNLVLLAAEEADSIWTDKFGFNSMKPEQTSNYGKNCSQMVTIKGLSMLQKMVPPRRLINMKGENPLLSRFVSFPAALVFCILLFEGILEPVNAICLSN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2791 427 Gene3D - 109 161 - -
Dere01g2791 427 PANTHER AUTOIMMUNE REGULATOR 324 380 - -
Dere01g2791 427 Pfam Auxin response factor 95 146 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2791 Dere-ChrDere01 42770820 42780045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2791 324 388 PHD Transcription Factor Family AT2G36720 52.308 9.65e-13 68.6