Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2789 ATGGGCCGGAATCTGCCATTTGTCCCTTTCCCAATTCCTAAACTGCCATCCCATCAAGTTTTGGTTTCTCTCTTCCAGTTCCGCCTTCTTCCATACCCGGGAGAGAAACTCGTGGACCCAACTCGTCGCCTTCCTCACTCCGTTTCGCTTCAAATTCAATCAATTTCCAAGGAAAAGAAGCAGGACTTGGAACCGGCGATTGCTTTGGAGTTTCAGTCTCTGAATCAATGTGATGCAATCGTTCCGACTCCGCCTTTAGAAATTGATACCGGGTCTGAGACTCAGTTGATGTCTTCTGCGCATGTTTCTGAGAATCCCAGCTGCAGAGCAGTTAAAGGTTCTATTGTGAATGGTTATATTGTTTATACTCGAACAAAGAAGTCTCGGTATTTGTGTAACGGGTCTTCTGAGAATGGTTATTTTAAGAGACTCAAGACCTTTGAAGATCGGAAGGCAAATGCAGACCTTCCAGTTGTGGATGGTGGAGGTGTGGAGGTAAACAATGTAGAAGGCAAATTCGAATCTGAAGTCCTTTGCAAATTGGAAAATAGTATTAAGTGTAATGAGTTAAAGAGCGAGCCGGCGCAGTCTCTTGCTGGGGACGGTAGCTCCATTGAGGTTCCTGTTGAGATTTTAAACGATAGTGAGGTACAGAAAAAGATTGTAGAAAAAACCATGGGTCGGTTTACGCGATCAGCATTGAAACCAAAGGTTGAATGTAGTGATGAGACGGGTACTGTTCCAGAAGCTGCTCTGACAGTAATAACTAGACCGGATGGGAAAGTCAACGCTGCTCTAAGTGCAGTAACAACTCCACGATATAAGTTCGAACTAAAAATATCCAAGAACATCGTGCTCAGTAAGAAGCCCATCACTGTCAAGGAACTCTTCAATACTGGTTTACTAGATGGGGTTTCACTAGTTTACATGGGCGGCGAGAAGATGGAGGAATCTTGTGCTCATGCTGTCTGTGCGAAGGACGCAGGGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAAATCATATAGGCGAGCAGCACAGTATATTTGCCTTGAAAATGGGAAGAGCCTGCAGGGTAGCCCCACTACATACGTTGGAGACGACTATTCAAAATATTGTTTGTTCTCCATCTGAAGAGAAATATTTCTCTTGCAAAAGGTGCAAAGGATGTTTCCGCTCGTCACGTGTGGAAAGAGTAGGGCCGATATGTAAAACTTGTGTGGAATTGAAGGAATCTGAGGACAGTTCAATCGATGCAGTTGGCAAAAGGGTCGGTAATGATAATCTCTTTTGTGCATCCACTATGTTCTTCTCAAGGGATCAGCGGTTACATAAATTCGTTTTTGAGGAAGGTGGATTGCCTGATGGAACAGAAGTAGCTTATTATGCACGTGGGCAGGTTGATTTTGTGCCTGATCCATGTCTACATTCATGCTATTCTGTCTATTACTGTATTAACTGGTTAATTCTGGCTGATAGAAACTGCTTGAGGGTTACAAAAAGAGCTTTGGAATACTTTGTCGGTGCTGCAACTCTGAGGTCAGCCCTTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCGTGAGCTTTTATCTGAATATGCATCTCTATCAAGCATTCCACGTGGTGACTGGTACTGTAAATTTTGCCAAAACATGTTCGAGAGAGAAAGGTTTGTGGCTCACAATGCCAATGCTGTGGCAGCTGGAAGGGTTGCGGGAGTTGATCCTATTGAACAGATAAGCAAGAGATGCATTCGCATTGTCAAAGACTTTGAAGCTGAGTTGAGCGGCTGTGCTTTATGCAGGAATTGCCCGAAGGAAATTGGTTTTGTTGCTCAGATTGCAACAGAATACATTCTACTTTGCAGAAGCTCCTGACCTCATAATGGCAAAATTGCTTCTCCTGAAACAAGGCCATTGCTTTCAGAGGCTGTTTCAATTTTTCATGAATGCTTTGATCCTATAGTTGATTCAACTAGTGGACGTGACCTTATTCCAGCCATGGTTTATGGAAGAAATGTGCGGAGTCAAGAGTTTGGAGGAATGTATTGTGCAATATTATCAGTCAATTCATCTGTTGTATCAGCTGCCATGCTCCGAATTTTTGGTAGAGATGTGGCTGAACTCCCTTTAGTTGCAACGAGCAATGGTACTCATGGAAAGGGTTACTTCCAAATACTCTTCGCCTGCATTGAGAGACTGCTGGCTTTCTTGAACGTGAAGAATCTTGTGCTACCTGCTGCCGAAGAAGCAGAATCTATGTGGACAGATAAATTTGGGTTCAACAAGATGAAACCTGAACAGGTTCCTATGGCTGACAATCGAGTTGTCCCTTGTGCTGCAGATTAG 2367 0.4394 MGRNLPFVPFPIPKLPSHQVLVSLFQFRLLPYPGEKLVDPTRRLPHSVSLQIQSISKEKKQDLEPAIALEFQSLNQCDAIVPTPPLEIDTGSETQLMSSAHVSENPSCRAVKGSIVNGYIVYTRTKKSRYLCNGSSENGYFKRLKTFEDRKANADLPVVDGGGVEVNNVEGKFESEVLCKLENSIKCNELKSEPAQSLAGDGSSIEVPVEILNDSEVQKKIVEKTMGRFTRSALKPKVECSDETGTVPEAALTVITRPDGKVNAALSAVTTPRYKFELKISKNIVLSKKPITVKELFNTGLLDGVSLVYMGGEKMEESCAHAVCAKDAGLFHLPNSRFMLANHIGEQHSIFALKMGRACRVAPLHTLETTIQNIVCSPSEEKYFSCKRCKGCFRSSRVERVGPICKTCVELKESEDSSIDAVGKRVGNDNLFCASTMFFSRDQRLHKFVFEEGGLPDGTEVAYYARGQVDFVPDPCLHSCYSVYYCINWLILADRNCLRVTKRALEYFVGAATLRSALHSLRSMQAGLLAGNRELLSEYASLSSIPRGDWYCKFCQNMFERERFVAHNANAVAAGRVAGVDPIEQISKRCIRIVKDFEAELSGCALCRNCPKEIGFVAQIATEYILLCRSSXPHNGKIASPETRPLLSEAVSIFHECFDPIVDSTSGRDLIPAMVYGRNVRSQEFGGMYCAILSVNSSVVSAAMLRIFGRDVAELPLVATSNGTHGKGYFQILFACIERLLAFLNVKNLVLPAAEEAESMWTDKFGFNKMKPEQVPMADNRVVPCAAD 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2789 788 PANTHER AUTOIMMUNE REGULATOR 215 468 - -
Dere01g2789 788 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 683 774 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2789 Dere-ChrDere01 42748773 42758276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2789 635 775 PHD Transcription Factor Family AT3G53680 68.085 9.21e-54 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2789 01 42748773 42758276 Dere02g1080 02 10315905 10323218 CCT