Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2786 ATGGCGGCGAAAGAAGCGTTGGATTCCCACAGCCAAGCGAGGCTAGCTATTCTAGAACTGGCCAACATGATCAGTGTCCCCATGTCCCTCAACGCCATCGTCCGCCTCAACGTCCCCGACGCCATCTGGCAATCCGGCTCCAACGTCCCCCTCTCCGCCTCCGAGATCCTTTCTCGTATAGTCCCCGCAGGCGGCGACGCCGAAAACCTTCAACGCATCCTTCGCATGCTCACCAGTTACGGCGTCTTCACCGAGCAAATAGGCACCGGCGGCGAGAGGAAATACTCCCTGACGGACGTTGGCAAAACCCTCGTCACTGACGACGAAGGCGTATCCTACGCGCCTTACGTGCTCCAGCACCACCAGGATGCATTGATGCGAGCCTGGCCATTGGTACATGAGGCAGTGGTGGACTCGACGAAGGAGCCGTTCGTGAAGGCGAACGGCGAGTCGGCGTACGATTACTATGTGAAAGAGCCGGAAATGAACGAATTGATGGTCAAGGCGATGTCCGGGGTATCGGTACCGTTCATGGAGGCGGTGTTGGAGGGGTACGATGGGTTCGAAGGGGTGGAGAGATTGGTGGACGTGGGTGGGAGCGGAGGTGATTGCCTGAGGATGATCCTACGGAAACATCCCAGCGTGCGAGAAGGGATAAACTTTGATCTGCCTGGAGTAGTGGCCAAAGCACCGGTCATACCAGGTGTAACCCATGTGGGTGGTGACATGTTCAAATCCATTCCCCAGGCGGATGCAATCTTCATGAAGTGGATACTAACAACGTGGACGGACGAGGAGTGCAAGAAAATAATGGAGAACTGTTACAAGGCTCTGCCGGCGGGAGGAAAATTGATTGCCTGTGAACCGGTGGTGCCGGAGGAGTCAGACGACAGCCATAGAACTCGAGCATTGCTGGAGGCTGACATTTTTGTTATGACAATCTACAGAGCTAAGGGCAAGCATAGGACCCAACACCAGTTCCGACAGCTTGCTCTCTCGGCTGGTTTCCCTCATTTCCGTGCCTTCCATTTTGACCACTTCTACACCCTCCTTGAGTTCCAAAAATGA 1068 0.5515 MAAKEALDSHSQARLAILELANMISVPMSLNAIVRLNVPDAIWQSGSNVPLSASEILSRIVPAGGDAENLQRILRMLTSYGVFTEQIGTGGERKYSLTDVGKTLVTDDEGVSYAPYVLQHHQDALMRAWPLVHEAVVDSTKEPFVKANGESAYDYYVKEPEMNELMVKAMSGVSVPFMEAVLEGYDGFEGVERLVDVGGSGGDCLRMILRKHPSVREGINFDLPGVVAKAPVIPGVTHVGGDMFKSIPQADAIFMKWILTTWTDEECKKIMENCYKALPAGGKLIACEPVVPEESDDSHRTRALLEADIFVMTIYRAKGKHRTQHQFRQLALSAGFPHFRAFHFDHFYTLLEFQK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2786 355 Gene3D - 2 109 IPR036388 -
Dere01g2786 355 PANTHER O-METHYLTRANSFERASE 20 343 IPR016461 GO:0008168
Dere01g2786 355 Gene3D Vaccinia Virus protein VP39 110 355 IPR029063 -
Dere01g2786 355 Pfam O-methyltransferase domain 132 336 IPR001077 GO:0008171
Dere01g2786 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 355 IPR016461 GO:0008168
Dere01g2786 355 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Dere01g2786 355 SUPERFAMILY "Winged helix" DNA-binding domain 10 107 IPR036390 -
Dere01g2786 355 FunFam Caffeic acid 3-O-methyltransferase 110 355 - -
Dere01g2786 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Dere01g2786 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2786 Dere-ChrDere01 42727460 42731997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2786 4 355 Monolignol Biosynthesis Gene Families AT3G53140 73.950 0.0 552