Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2782 ATGGACACGCTTATGTTGGTGCCTCCGTGGCTTGAGCCACTGCTAAAGACATCGTTCTTCAGCGTCTGCCGCTTTCACGGTGACGCCGCTAGGAGCGAGTGTAATATGTTCTGCCTCGACTGTAATCGCGACGCATTTTGCTTTTATTGCCGTTCATCAAAACACAAGGATCACCAAGTCATTCAGATAAGGCGATCTTCTTATCACGATGTAGTGAGAGTGTCGGAGATTCAGAAGGTGTTGGATATAAGTGGGGTTCAGACATATGTGATAAACAGTGCGAGAGTTCTGTTTCTGAACGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTTTTGGACCCATTCCGGTTCTGTTCTTTGGGATGTAAGCTTGTGGGAGTGAAGAGAAATGGAGATGCAAGCTTTGCTTTGGATGGAAATAATGAGGGGATATCAAGGAGATCAGTATCGTCCAGAGAAGAAGAAGAATCGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTCCTCCACCTGCTTCAAGTGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCTCCATTTGGCTCCTAA 609 0.4745 MDTLMLVPPWLEPLLKTSFFSVCRFHGDAARSECNMFCLDCNRDAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGVKRNGDASFALDGNNEGISRRSVSSREEEESREGSQQDMYPATPPPPASSARRRKGIPHRAPFGS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2782 202 MobiDBLite consensus disorder prediction 158 172 - -
Dere01g2782 202 SUPERFAMILY B-box zinc-binding domain 21 65 - -
Dere01g2782 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 200 - -
Dere01g2782 202 MobiDBLite consensus disorder prediction 147 202 - -
Dere01g2782 202 Pfam PLATZ transcription factor 64 135 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2782 Dere-ChrDere01 42703984 42705256 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dere01g2782 PLATZ 9.4e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2782 01 42703984 42705256 Dere02g1085 02 10364067 10365228 CCT
Dere01g2782 01 42703984 42705256 Dere01g2782 01 42703984 42705256 ECH