Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2762 ATGGAACCCAATGGACTAGGTGGTGGAATGTTTTCTAGCATCGGTTCTGGATTGCTTGGTGGTGTAGAAAACCCGTTACAGCAGCAACAACAAAACCTCCCTAATCCTCAAAATCCTCATCCTATGCATCACCCCCAGATGGTTTCCTATGCTTCTTCCCACCATGACACTGATATTCCTCAGCCACAACCCCAGCAATCCATCAAGCATGGGTACCCTTATTCGGCCAAGATTAATCAACAAATGGCCCTTAGTGATGAAGACGAAGCTGGGTTCGCAGCAGAGGACAACGTCAGCTCTGGCGATCCCAAAAGGAAAATATCACAGTGGCACAGAATGAAGTGGACGGACACTATGGTTAAGCTCTTAATAATGGCGGTTTATTATATTGGCGATGAAGCTGGTTCAGAAGCGGCTGATAAGAAGAAGCCTACGGGTTTGTCGCAGAAGAAAGGAAAATGGAAATCGGTGTCGAGGGCTATGATGCAGAAGGGGTATTTCGTGTCTCCTCAGCAATGCGAGGATAAGTTCAATGATTTGAACAAGAGGTACAAGAGAGTGAACGATATTCTGGGAAAAGGAACGGCTTGCCTGGTAGTGGAAAATCACAACTTGTTGGACACAATGGACTTGTCACCGAAAGTGAAAGAGGAAGTTCGAAAATTGCTCAATTCCAAGCACCTTTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGCCATATGAGCACCATTGGGCCTCAACAATCCCCAGAGGTGGGAACAGAACCATCTCAGGCGGTTCAACCGCAACAGCAGCAGCAACGATGTTCTCACTCGTCGGGAAATGGGATGGCGAATTTGGGAAAGCCAGAATCAGAAGGACTCAAGATATTGAAAGGGGTAAATAGGGAAGAGGAAGACGATGAGGACGAAGACGATGACTCAGAGGATTCTTCTGACGAGGACGAAGAAGAGTCGGGTGAAGGGGTTTCAAGGGATAAAACTGGGAATGCACATGAAGACGAGGATGAGAATTATGATGCAAGGTCATCAATGAAGAGACCAAGAAAAGCAGAAATTTGTGTGTCATCAAAGTTAATGCCGGAAATAAGCAATGAAGTGACGGGTGTGCTACAGGATGGGGGAAGAAGCACGTGGGAGAAAAAGCAATGGATTAAGAGAAAGATAGTGCAAATGGAGGAGCAGCAAATAAGGTATCAGATTGAAGGATTTGAGCTGGAAAAGCAGAGGCTGAAATGGGTAAGGTTTAGCGGCAAGAAGGAGAGGGAAATGGAGAGAGCCAAGCTTGAGAACCAGCAGAGGCTGCTGGAAAATGAGAGGATGGTTTTGCTGATTCGCCAGAAGGAGCTTGAGCTGCTGAATCTTCATCACCAACAAAAGCAACAACATTCTTCTAACTGA 1407 0.4606 MEPNGLGGGMFSSIGSGLLGGVENPLQQQQQNLPNPQNPHPMHHPQMVSYASSHHDTDIPQPQPQQSIKHGYPYSAKINQQMALSDEDEAGFAAEDNVSSGDPKRKISQWHRMKWTDTMVKLLIMAVYYIGDEAGSEAADKKKPTGLSQKKGKWKSVSRAMMQKGYFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENHNLLDTMDLSPKVKEEVRKLLNSKHLFFREMCAYHNSCGHMSTIGPQQSPEVGTEPSQAVQPQQQQQRCSHSSGNGMANLGKPESEGLKILKGVNREEEDDEDEDDDSEDSSDEDEEESGEGVSRDKTGNAHEDEDENYDARSSMKRPRKAEICVSSKLMPEISNEVTGVLQDGGRSTWEKKQWIKRKIVQMEEQQIRYQIEGFELEKQRLKWVRFSGKKEREMERAKLENQQRLLENERMVLLIRQKELELLNLHHQQKQQHSSN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2762 468 PANTHER F16F4.11 PROTEIN-RELATED 1 456 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 1 70 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 85 104 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 22 37 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 245 351 - -
Dere01g2762 468 Coils Coil 421 448 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 323 351 - -
Dere01g2762 468 Pfam Myb/SANT-like DNA-binding domain 112 235 IPR044822 -
Dere01g2762 468 MobiDBLite consensus disorder prediction 299 322 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 245 281 - -
Dere01g2762 468 MobiDBLite consensus disorder prediction 50 70 - -
Dere01g2762 468 Gene3D - 115 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2762 Dere-ChrDere01 42492246 42493652 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere01g2762 Myb_DNA-bind_4 7.3e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2762 01 42492246 42493652 Dere01g2762 01 42492246 42493652 ECH