Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2743 ATGGAAATGCCCGGTAGAAGATCCAACTACACACTTTTGAGTCAAATTCCTGATGACCAGTACGTTGGCGGAGCCACCTTGTCCGGAACAGCTGCTCCCTCTTCGTTGTTTGATTCTTCATCTGGGGACGGAAAGAACAATAAAGGCAAGTTGGACAGAGGGTTTGATTGGGACTTGGGTGCTGATCATAGAGTGACTCAGCCGGGGAACCGGATCGGAAATTTGTATTCATCGATCGGGTTGCAGAGGCAGTCTAGTGAGAGCAGTTTTGGTGAAAGCTCGCTATCAGGTGAGTATTATGCTCCAACACTGTCTACAGCAGCTGTGAATGAGATCGATGGCTTTGGGTACGTGCATGATGATGGACTCAGGATTGGTGGAGGCGAGTTAAGAACGAAGTTGACAGAAACTGCGGTGAGAACAGGTGGGTCGTCATCAGGAAAAAGTTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGTTAGCTTTGGCACTTCGTCTTTCATCTGAGGCAACCTGTGCTGATGATCCCAATTTCATGGATCCAGCTCCAGATGAATCTGCTTTAAGGTCGTCATCCTCAAGTTCTCCAGAGACAATGTCACATAGATACTGGGTTAATGGCTGCCTATCATACTCCAACAAAATTCCTGATGGCTTTTACTTAGTTCATGGGATGGATCCCTTTGTGTGGACTGTGTGCACTGATCTGCAGGAAAATGGCCGAATTCCATCAATTGAATCACTAAAGTCTGTGAACCCCTGCACCGACTTGTCACTCGAAGTAGTTTTGGTTGATCGACGTAGTGATCCCAACTTAAAGGAATTGCAAAATAGAGTACATAGTATTTCATGTAGTTGTATAACCTCAAAAGAGGTTGTAGACCAGCTTGGCAAGTTGGTTTGCAACTGGATGGGGGGTTCAGCATCTGTTGGGGAAGATGACTTTGTTTCTATCTGGAGGGAGTGCATCAATGATCTTAAAGATTCTATAGGATCTGTTGTTCTTCCAATAGGTAGTCTTTCTGTTGGCCTCTGCAGGCATCGTGCCATATTATTCAAAGTACTAGCTGACACCATTGATTTACCGTGTCGGATTGCAAAGGGCTGTAAATATTGCTCAAGAGATGATGCATCCTCTTGTCTTGTCCGATTTGGAATTAATAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTGCTTGTTTGAGCCAGATTCTTTGCTCAATGGTCCATTTTCCGTCTCATTTCCTTCACCATTGTGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCAGATCAACTGTCTCTTGAGCTTGCTTTTGACAATAATTCCACAGAACAGTTTGATGGGAAGTGCAGGGACAGAAATAACCCTAGGTCAATTTCAAAGGAGAGCAACAGAATAGAAGATAAAGGTTCTGAAGCATTTAATTCATGTAACCCTCCCCAGAACATTGCTGACTCTTCAAATTTGGGCAAGGATCTGCTACCTATAAATCATAACCGACCTGTTGGCCTTAGAGATTTTCCAAAGCCTTTAGTACTTAGAAATCCACATGTGGATGGTATGGAGGGTAGGCGGTTTGTTGATGGAAGCCAACTTGTTCCTAGCAAACCAAACAGAGATCTTGGCCTTGATATGGAGGATTTGGACATACCATGGAGCGATCTTGTTTTAAAAGAGCGAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCTGATGTTGCTGTTAAAATTCTGATGGAACAGGATATTCATGCTGAACGTTTCAAGGAATTTCTGAGGGAGGTTGCAATTATGAAGCGATTGAGGCATCCAAACATTGTTTTATTTATGGGTGCAGTCACCCAGCCTTCACACTTATCAATTGTCACAGAATATTTATCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCCGGTGCCAAAGAGATGTTAGATGAGAGGCGTAGGCTTAGCATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGTAACCCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAAATATACCGTGAAGGTTTGTGATTTTGGGCTTTCCCGTCTAAAGGCAAATACATTTCTTTCATCTAAGTCAGCTGCTGGGACTCCCGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCAGATGTTTACAGCTTTGGTGTAATCTTGTGGGAGCTAGCAACATTGCAACAACCCTGGGGTAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGCAAAAGGCCTGAGATCCCACGTGATTTGAATCCCCAAGTAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGTCCTTCTTTTGAAAGTATCATGGATTCTTTGAGGCCATTGATCAAACCCCCTACACCTCGACCTGATCGTCCAAACCTGCCATTACTTTCGAGTCCCAGAGTCAGTTGTATATCTGTGTTCTAA 2568 0.4404 MEMPGRRSNYTLLSQIPDDQYVGGATLSGTAAPSSLFDSSSGDGKNNKGKLDRGFDWDLGADHRVTQPGNRIGNLYSSIGLQRQSSESSFGESSLSGEYYAPTLSTAAVNEIDGFGYVHDDGLRIGGGELRTKLTETAVRTGGSSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFMDPAPDESALRSSSSSSPETMSHRYWVNGCLSYSNKIPDGFYLVHGMDPFVWTVCTDLQENGRIPSIESLKSVNPCTDLSLEVVLVDRRSDPNLKELQNRVHSISCSCITSKEVVDQLGKLVCNWMGGSASVGEDDFVSIWRECINDLKDSIGSVVLPIGSLSVGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGINREYLVDLIGKPGCLFEPDSLLNGPFSVSFPSPLCFPRLKPAEPTIDFRSLAKQYFSDQLSLELAFDNNSTEQFDGKCRDRNNPRSISKESNRIEDKGSEAFNSCNPPQNIADSSNLGKDLLPINHNRPVGLRDFPKPLVLRNPHVDGMEGRRFVDGSQLVPSKPNRDLGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDIHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPSHLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKGKRPEIPRDLNPQVAAIIEACWANEPWKRPSFESIMDSLRPLIKPPTPRPDRPNLPLLSSPRVSCISVF 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2743 855 MobiDBLite consensus disorder prediction 176 201 - -
Dere01g2743 855 CDD STKc_MAP3K-like 577 825 - -
Dere01g2743 855 SUPERFAMILY Protein kinase-like (PK-like) 558 824 IPR011009 -
Dere01g2743 855 Pfam Protein tyrosine and serine/threonine kinase 572 825 IPR001245 GO:0004672|GO:0006468
Dere01g2743 855 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Dere01g2743 855 MobiDBLite consensus disorder prediction 463 482 - -
Dere01g2743 855 FunFam Serine/threonine-protein kinase isoform 1 561 649 - -
Dere01g2743 855 FunFam Serine/threonine-protein kinase CTR1 650 835 - -
Dere01g2743 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Dere01g2743 855 ProSiteProfiles Protein kinase domain profile. 571 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2743 855 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 174 828 - -
Dere01g2743 855 Pfam Ethylene-responsive protein kinase Le-CTR1 199 403 - -
Dere01g2743 855 Gene3D Phosphorylase Kinase; domain 1 564 649 - -
Dere01g2743 855 PRINTS Tyrosine kinase catalytic domain signature 733 743 IPR001245 GO:0004672|GO:0006468
Dere01g2743 855 PRINTS Tyrosine kinase catalytic domain signature 645 658 IPR001245 GO:0004672|GO:0006468
Dere01g2743 855 PRINTS Tyrosine kinase catalytic domain signature 796 818 IPR001245 GO:0004672|GO:0006468
Dere01g2743 855 PRINTS Tyrosine kinase catalytic domain signature 752 774 IPR001245 GO:0004672|GO:0006468
Dere01g2743 855 PRINTS Tyrosine kinase catalytic domain signature 686 704 IPR001245 GO:0004672|GO:0006468
Dere01g2743 855 SMART serkin_6 571 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2743 855 Gene3D Transferase(Phosphotransferase) domain 1 650 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2743 Dere-ChrDere01 42248845 42257647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2743 1 841 MAP Kinase Kinase Kinase AT5G03730 68.605 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere01g2743 PK_Tyr_Ser-Thr 4.8e-71 CL0016