Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g2740 | ATGGATAGCTCAAGTAGATCGTTCGAAAGATCGAGAGAGCCAGGTATCAAGAAACCCCGACTGACCGACGAGCTCGAGCGCGGCTCAAATTCCAGTGTCCGACCGTCTCAGCGACAAGTGGCTCCTGGGGTTAATTCGTTGGCCTCTGCAAGGTTTCGGACAAACGACAGAGATTCGGAAAGCAGTGACTCGGGTCGCGGTGGATACCAGCCTCAACCGCTCCACCATGAGCTTGTAACTCAGTATAAAACCGCGCTTGCTGAGCTGACTTTCAATTCTAAACCGATAATTACCAACTTGACTATAATTGCAGGCGAGAGTCTTCATGCTGCTAAGGCAATTGCTGCCACTGTTTGTGCTAACATTCTAGAGGTTCCTACTGAACAAAAGCTGCCATCTCTTTATCTTTTGGACAGTATTGTTAAGAATATTGGGCGGGACTATATAAAATACTTTGCTGCTAGACTACCTGAGGTATTCTGCAAGGCATATAGACAGGTTGATCCTTCTGTTCATTCCAGTATGAGGCATCTTTTTGGAACTTGGAAAGGAGTTTTTCCTCTTCAGACCCTCCAGATGATTGAGAAAGAACTCAGCTTCACCCCCGCTGTCAATGGTTCATCTTCTACACTCAGGAGTGATTCACAGTCACACCGACCGCAGCATAGTATCCATGTGAATCCTAAATATTTAGAGAGGCAGCGTCTTCAGCAGTCTGGCAGGACCAAAGGAACAGCTAATGATATGGCTGGAGCTATTGCAAACTCAACTGACAGTGCAGAAAGGCCAGATAGAGCATTGAGTGCTGCACGTCCATGGGTGGATTCCAGTGTTAACATGCAAAACATTCAGCGCTCTAATATAGATGCATACAACAATTCTGTTCCTGAAAAGGGCATTGGCACATCCTATGGAGGCAATGAATACAGTTCTGATCTTTCAAAGAATTCAGGCTTGGGTATTGGAAGAACTGGTGGTAGGGTCTCCGAGGTAGCACGTGACAAAGCTTGGTTTAAAGCAGGCAGTAGTGCTGCTGAGATGATGTCGGGCCAAAGAAATGGTTTCAGTCTCAAGCGTGTTTTATCAAATCATGAACCACCGAAGTCTATGAATTTAGATGAACGCAACCCATCAACACAGAGCTTAACTAGCATAAAAAGCAGTGTGTTGTCAAGTAGCTGGAAAAATTCTGAGGAAGAGGAGTACATGTGGGATGAGGTGAATGCTGGACTGACTGAGCGTGGTGCATCCAATACCTCTAATAACTTGAACAAAGATCAGTGGACTGGTGATGATGACAATTTGGCAGTTGAAGATCACCTTCAAATCACGTTTCCTGTAGATAGGGAAGTATCCACTGAAATGAAACAGCTACCTGCTTTGGGTCATCGGCCATCATTATCATGGCAATTGCAGGAGCAGCACTCATTTGATGAGCTGAATCGTAAACCACGTCCTTCAGAAGGTTTTGCATCTGCTCTTGGTAAGTTACCAACCAGTGCAAATTCTTCTGCTGTCAAGATGGGAAATCAACCTTTCCTGTCAAAAGCAACAACAGGATCAGTAGGAATGGTGCGACAACAGCAGTTTCAGTCTGTAGGAGCAGAGTCTCCAATGCAATCACCTCTGCGACAACAGTCGCCATCACAACCAGTTAATGTGCGTCATCCTCCTCATCAATTGCGAAATTTGGCTGAGCTAGACTGTTCACAGACTCCGAAAATGTCTCAATTCTCAGTTGTACAGAGCCAAGATATTCAAGATTCTTCGCCTGTCCTTCCACATACCATTCAGTTTGGTAACCCACGAAGATCACAGCAAAATGACTTGCGAGGTTCATCATCTTCTGGGTCTACTTTTCAGCCAAGACATCATAATGCAGCATCACAGCAGCATCAACTTGGTTCTTCTCAGACTGAAGCCTCTGATTTGGCTGAAAAGACACCTCACTCTAAATTATCTATAGCTTCAGAGCAGTCAACCACAAGTAATTTGTTTGCTGCAGTTATGAAGAGTGGAATTTTCACCAACAATTCATTATCCAATAGTCGGCCTATTGCAAGTTTCTTGGATAGAAGGAACCTGCCATCAAAATTGGGGGTTCAGCCTTGTCAGCCAAGTGGATATTCTCCTACCACATCAATTTCTTCAGGGCCTGGGGTTGCATCACCATCTTCATTAGGTCCTTCTCCCAATGATGACTCATCTTCTCTGCCAAAAGCATCTGAAGGAAAGGTTAAAACTCCACCAAGGGTCCCTGCTCTGCCACCAGCTTCCTCTCCTGTGAGTAGTGCCTCAGCCAATACTGAGAATGCCACCAATAATAAACCTAATCCAGTTTCAAACCTTTTAAGTTCATTAGTTGCAAAGGGTTTGATTTCGGCAAAAACAGATTCACCGGCTAAGGTGCCAGCTGGGGTGCTGATCCGATCAGAAGATGAAAGCCAAAGCATTACCACCAATAGCACTTTGCCAGTTGCTTCAGTTTCTGGTGCTGCAGCTGTCCCTGTACCATCTACCAGAGATGATCAACATGCAAAAACCACAGAAATAAAAAATATTATTGGCTTTGAGTTTAAGCCCAATGTAATCCGAGAATTGCATATACCTGTGATCAGAGAACTATTGGATGATTTTCCACATCATTGCAGCATTTGTGGCCTTAGGCTTAAACATCAAGAACAGTTTAATAGACACTCAGAGTGGCATGCTACAAGAGAAAGAGTAAAAAAGGATGTAATGAAGGCCTCGAGAAGATGGTATTTAAGGTCAACTGACTGGATTGTTGGCAAGGATGAAGTTTCATGTGAGTGTGAGTATATTGATTCTGTAGATTCACATAGCAATAAATCAGACAATGGTGAAGTGAATATTATGATTCCATCAGACGAAGACCAGTGCTTGTGCGTGTTGTGTGGTGAGCTATTTGAAGATGTTTACTGCCTAGAAAGGGATGAGTGGATGTTCAAAGGGGCTGTCTACATGTCTTTATCGGATAGTGATGGTGAGATGTGTATTAATGTCAATACTGCAAGGGGTCCCATAGTTCATGCAAGGTGCTTATCAGAGAGCTCCATATCCAATGCCACTACAAAGGAACAGGATTGA | 3108 | 0.4411 | MDSSSRSFERSREPGIKKPRLTDELERGSNSSVRPSQRQVAPGVNSLASARFRTNDRDSESSDSGRGGYQPQPLHHELVTQYKTALAELTFNSKPIITNLTIIAGESLHAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHSSMRHLFGTWKGVFPLQTLQMIEKELSFTPAVNGSSSTLRSDSQSHRPQHSIHVNPKYLERQRLQQSGRTKGTANDMAGAIANSTDSAERPDRALSAARPWVDSSVNMQNIQRSNIDAYNNSVPEKGIGTSYGGNEYSSDLSKNSGLGIGRTGGRVSEVARDKAWFKAGSSAAEMMSGQRNGFSLKRVLSNHEPPKSMNLDERNPSTQSLTSIKSSVLSSSWKNSEEEEYMWDEVNAGLTERGASNTSNNLNKDQWTGDDDNLAVEDHLQITFPVDREVSTEMKQLPALGHRPSLSWQLQEQHSFDELNRKPRPSEGFASALGKLPTSANSSAVKMGNQPFLSKATTGSVGMVRQQQFQSVGAESPMQSPLRQQSPSQPVNVRHPPHQLRNLAELDCSQTPKMSQFSVVQSQDIQDSSPVLPHTIQFGNPRRSQQNDLRGSSSSGSTFQPRHHNAASQQHQLGSSQTEASDLAEKTPHSKLSIASEQSTTSNLFAAVMKSGIFTNNSLSNSRPIASFLDRRNLPSKLGVQPCQPSGYSPTTSISSGPGVASPSSLGPSPNDDSSSLPKASEGKVKTPPRVPALPPASSPVSSASANTENATNNKPNPVSNLLSSLVAKGLISAKTDSPAKVPAGVLIRSEDESQSITTNSTLPVASVSGAAAVPVPSTRDDQHAKTTEIKNIIGFEFKPNVIRELHIPVIRELLDDFPHHCSICGLRLKHQEQFNRHSEWHATRERVKKDVMKASRRWYLRSTDWIVGKDEVSCECEYIDSVDSHSNKSDNGEVNIMIPSDEDQCLCVLCGELFEDVYCLERDEWMFKGAVYMSLSDSDGEMCINVNTARGPIVHARCLSESSISNATTKEQD | 1035 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 205 | 223 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 698 | 779 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 759 | 779 | - | - | |
Dere01g2740 | 1035 | FunFam | polyadenylation and cleavage factor homolog 4 | 71 | 199 | - | - | |
Dere01g2740 | 1035 | ProSiteProfiles | CID domain profile. | 74 | 202 | IPR006569 | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 575 | 660 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 700 | 742 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Dere01g2740 | 1035 | SMART | 558neu5 | 77 | 199 | IPR006569 | - | |
Dere01g2740 | 1035 | Gene3D | - | 71 | 199 | IPR008942 | - | |
Dere01g2740 | 1035 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 883 | 903 | IPR013087 | - | |
Dere01g2740 | 1035 | SUPERFAMILY | ENTH/VHS domain | 76 | 204 | IPR008942 | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 362 | 384 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 28 | 52 | - | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 205 | 232 | - | - | |
Dere01g2740 | 1035 | CDD | CID_Pcf11 | 79 | 191 | IPR047415 | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 530 | 556 | - | - | |
Dere01g2740 | 1035 | Pfam | CID domain | 83 | 192 | IPR006569 | - | |
Dere01g2740 | 1035 | MobiDBLite | consensus disorder prediction | 575 | 644 | - | - | |
Dere01g2740 | 1035 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 51 | 1028 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g2740 | Dere-ChrDere01 | 42186869 | 42194177 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g2740 | 73 | 411 | C2H2 Transcription Factor Family | AT4G04885 | 38.462 | 2.98e-54 | 201 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere01g2740 | 01 | 42186869 | 42194177 | Dere01g2740 | 01 | 42186869 | 42194177 | ECH |