Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2731 ATGCTCGCTGAAATTATGAAAGGGGAAGAAGAAGTAATCATGAAGAAGCGAAGGGCTGGAAGGAAGAAGTTCCACGAGACTCGCCATCCCACCTACAGGGGCGTGAGGCAAAGGAATGGGAAGTGGGTGTGCGAGCTGCGACAACCCAACAAGAAAACTCGCGTATGGCTTGGGACCTTCGCCAACCCTGAGATGGCAGCTGTTGCGTACGATGTTGCTGCCCTGGCTTTCAAGGGCGACTCTGCTTCCTTAAATTTCCCGCACGCAGCGACCTCCTTGCCACGCCTTAATTCCCACACATCCTCTGTCAGAGCCATTCAGTTTGCAGCCATGCAGGCAGCTGAGAAGTTCTTTTGCAGTGACGAAGACAAACAGGTTTCTGATTTGTCGTCGGGCTGTGGGTATGGGTACTCAGTGTCACAGGTGGGTTGGGTAGAAGAAGATGAAGCACCGAGGAGGAGTTTGTATTGGGACGAAGAGGAGGTGTTTAACATGCCAGGACTCATGAACAGCATGGCAGAAGGGTTGATTATCACACCCCCAGCCTTGGAGAGAGGCTTCAATTGGGTTGGTATGGAAACTACCATCGACTTGACTCTCTGGGGAGATTGA 612 0.5196 MLAEIMKGEEEVIMKKRRAGRKKFHETRHPTYRGVRQRNGKWVCELRQPNKKTRVWLGTFANPEMAAVAYDVAALAFKGDSASLNFPHAATSLPRLNSHTSSVRAIQFAAMQAAEKFFCSDEDKQVSDLSSGCGYGYSVSQVGWVEEDEAPRRSLYWDEEEVFNMPGLMNSMAEGLIITPPALERGFNWVGMETTIDLTLWGD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2731 203 PRINTS Ethylene responsive element binding protein signature 69 89 IPR001471 GO:0003700|GO:0006355
Dere01g2731 203 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Dere01g2731 203 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Dere01g2731 203 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Dere01g2731 203 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 15 201 IPR045277 GO:0003700
Dere01g2731 203 FunFam Ethylene-responsive transcription factor 2 30 88 - -
Dere01g2731 203 CDD AP2 32 89 IPR001471 GO:0003700|GO:0006355
Dere01g2731 203 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
Dere01g2731 203 ProSiteProfiles AP2/ERF domain profile. 31 87 IPR001471 GO:0003700|GO:0006355
Dere01g2731 203 SMART rav1_2 31 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2731 Dere-ChrDere01 42116212 42116823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2731 16 201 AP2-EREBP Transcription Factor Family AT4G25470 45.989 1.06e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere01g2731 AP2 5.6e-11 CL0081