Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2730 ATGGCTCACAAGCATTTACACGAGCTACTCAAGGAAGATCAAGAACCCTTCCTTCTAAACAAGTACATGTCCGAAAGGCGTAGCCAGCTGAGAAAAAGGCCTTCCCCCACCACTACTCTGCAACTCAAGAAACCAAAGCCAATCTATCATAACTCAAACTTCCCTCATAATTTCTGTAAAAACGCTTGCTTTTTATCTTTTCGCAACACTCCTGACCTCTTAAACTCTCCCCTCCTCGAGTTCGCATCCCCAGCCAAAAGCCCCTGTAAGTCCCCCAATGCCATCTTCCTCCACATCCCTGCCCGAACTGCCGCTCTTCTTCTCGAAGCCGCTCTTAGGATTCAGAAACAGTCCTCGTCTTCTAAATCCAAAACCCGCAACAAAACCAATGGTTTTGGTTTGTTCGGGTCGTTGTTCAAGAGACTAACGCAGCGAAACCGAACGAGGGAAATACAAGGGGGTGGGGTTCATGGAAGCAAGAAAGAGCAAGAGCAAACGGTATCTACTGAAAAGGTCAGCTTTCCATGCTCTTACAATGGACGCCCTAGTAGTGCTGTATGGTCTGAGACCAATGAGGATAAATCATTGGACATGGAAACGTCTAGTAGTACTAGCCAGTCTGATGAATCCGACGAGATTGACTTCGTTACCAAACAGAAACTCGTTACTGATTGTGCTTGCTGTGATCGCGGCTTCTGCGAAAGCCCTTTCCGTTTTGTTCTACAGAGGAGCCCCTCTTCCGGTCGCCAGACGCCGGAATCAGCGTCACCCAGTCGCCACAAAACAGAGGACAAAGAAAAAAACCGAACAGAGAGTCTCGAGAAATTTCAAACAGGGGAAGAAGAGGAAGAGAAGGAGCAGTGCAGCCCAGTATCTGTTTTAGACCCACCCTTCGAGGACGATGACGATGGGCATGAAAACGACGACGAGGATGATGGTTTTGATTTGGAGTGCAGCTATGCCATTGTACAGAGAGCAAAGCAGCAGCTATTGTACAAGCTTCGTAGTTTTGAGAGACTAGCAGAGTTGGATCCAATTGAACTTGAAAAAAGAATGCTAGAACAAGAAGACGAAGATGATGAAACATCAAATAAAGAAAAGGACTTGAAAGGGTTAGTCTTGGAAGTCCTCTGCCGGTCAAGCTTCCATTACAGACGGCAAATACCAGAAGACCTCAAGAGACTGGTTTCAGATCTCATTATGGAGGAAGAAAGAGAACTTAATTCCTTAAAGGATAGGGAAATGGTGATAAGCAGGGTATGTAAGAGGCTGGAATTGTGGAAGGAAGTGGAATCCAATACAATTGATATGATGATAGAACAGGACTTCTGTGGAGAGGATGGTCGATGGAAGAAAAATGAAGAGCACCAAAAGGAGGTGGCAAGGGAGCTTGAACTTGCTATATTTGGGCTTCTAGTGGAAGAATTTACAGAGGAACTTGCATGTTGA 1449 0.4576 MAHKHLHELLKEDQEPFLLNKYMSERRSQLRKRPSPTTTLQLKKPKPIYHNSNFPHNFCKNACFLSFRNTPDLLNSPLLEFASPAKSPCKSPNAIFLHIPARTAALLLEAALRIQKQSSSSKSKTRNKTNGFGLFGSLFKRLTQRNRTREIQGGGVHGSKKEQEQTVSTEKVSFPCSYNGRPSSAVWSETNEDKSLDMETSSSTSQSDESDEIDFVTKQKLVTDCACCDRGFCESPFRFVLQRSPSSGRQTPESASPSRHKTEDKEKNRTESLEKFQTGEEEEEKEQCSPVSVLDPPFEDDDDGHENDDEDDGFDLECSYAIVQRAKQQLLYKLRSFERLAELDPIELEKRMLEQEDEDDETSNKEKDLKGLVLEVLCRSSFHYRRQIPEDLKRLVSDLIMEEERELNSLKDREMVISRVCKRLELWKEVESNTIDMMIEQDFCGEDGRWKKNEEHQKEVARELELAIFGLLVEEFTEELAC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2730 482 MobiDBLite consensus disorder prediction 243 313 - -
Dere01g2730 482 Coils Coil 393 413 - -
Dere01g2730 482 PANTHER OS04G0572500 PROTEIN 1 480 - -
Dere01g2730 482 MobiDBLite consensus disorder prediction 168 210 - -
Dere01g2730 482 MobiDBLite consensus disorder prediction 256 289 - -
Dere01g2730 482 MobiDBLite consensus disorder prediction 296 313 - -
Dere01g2730 482 MobiDBLite consensus disorder prediction 149 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2730 Dere-ChrDere01 42105860 42108664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2730 2 299 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 44.970 2.21e-61 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2730 01 42105860 42108664 Dere01g2730 01 42105860 42108664 ECH