Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2681 ATGACTTTTTCATCAACATTCCCACCCCCCCCCCCCCCACCCAATGCTCCCTTCACAGATATAATCCTTAATCCTGCGTTTACACCTAGCATTAACTCAGCCATTCCCTCTCTGAGTTTCTCCGCCACATATCTATCTCTTCCCTATCGAGAAATGAGAATGCTGGGGAAGAAGATGGTGTCGATCAAGAAGCTAGCGAAGAAGGTGAAGGGAGTTGGTGCTGAACCTGGCGCTGATTCTGCTCACCATGAGTGTTTGCTCAAGGAATATGCAGAAGAATCCCCTTCGAATGCCACCCCGACTGGTTTTTTCGCACTTTATGTGGGGGAGGAGCGTCAGAGATATGTGGTTCCAACCTCGTATCTTTCTCACCCGTTGTTCAAGATCTTGTTGGAAAAGGTGTACGATGAATTTGGGTTTGAGCAGAGGAATGGCCTCGTGGTTCCCTGCAGTGTTGCCTCGTTTCAGGAGGTGCTGAATGCTATAGAATGCAGCAATGGCAAGTTTGACTTGGCCAAAATTTTTGAGGATTTTATTTGTTCTGCATAA 549 0.4718 MTFSSTFPPPPPPPNAPFTDIILNPAFTPSINSAIPSLSFSATYLSLPYREMRMLGKKMVSIKKLAKKVKGVGAEPGADSAHHECLLKEYAEESPSNATPTGFFALYVGEERQRYVVPTSYLSHPLFKILLEKVYDEFGFEQRNGLVVPCSVASFQEVLNAIECSNGKFDLAKIFEDFICSA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2681 182 Pfam Auxin responsive protein 82 161 IPR003676 GO:0009733
Dere01g2681 182 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 84 158 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2681 Dere-ChrDere01 41653312 41653860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2681 78 163 Calmodulin-binding Proteins AT5G20810 45.349 2.81e-20 82.0