Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2667 ATGGCAGATATGCCTCCGGGATATCGTTTCTACCCAACTGAAGAGGAGCTTATTTCCTTCTACCTTTACAACAAGCTCGAAGGGGAGAGGGAGGACATGAACCGGGTCATACCTGTGCTTGATATTTATGATTACAACCCCTGGCAACTCCCACACGTATCGGGAGAGGCGAGTCTAAGAGACACGGAGCAATGGTTCTTCTTCATTCCAAGACAAGAAAGCGAAGCCCGTGGAGGAAGACCTAGACGACTCACAACCACTGGGTACTGGAAGGCAACTGGGTCTCCTAACCATGTGTATTCTTCTGATAATCGCATCATTGGGATGAAAAGGACCATGGTTTTCTATAACGGAAGAGCCCCCAACGGAAAGAAAACCGATTGGAAGATGAACGAGTATAAGGCCATCAAAGGCGAAGCATCTTCGAGTAGGTCAATTCCTATGTGCTTTGATTTGCAGTTAAGGCAGGAGTACAGCTTATGCAGGGTGTACAAGAAATCAAAGTGCTTGCGGGCGTTTGATAGACGGCCACCTCCAAGGAGGGATACGGGAAGTTATCCAAATTATGTTCAGAGAGCTGAAGATAGATCAGAGGGTACAACTTCTTCGTCTAACCAGTATCCCCATAACCCTCCTCAAACGGCGGAGACAGGTACGACAAGCTCACCAGAGAGTTCGTCATCTGCAGACCATGGCCAAGCTTCACAGAGTGGGGATGCGAGTCAAATGGATTTGGAGGAGCCCTTGTTGGATTGGGAACAAGTTGATTGGTTTCTTGGCAAGGATGCCTAG 792 0.4823 MADMPPGYRFYPTEEELISFYLYNKLEGEREDMNRVIPVLDIYDYNPWQLPHVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYNGRAPNGKKTDWKMNEYKAIKGEASSSRSIPMCFDLQLRQEYSLCRVYKKSKCLRAFDRRPPPRRDTGSYPNYVQRAEDRSEGTTSSSNQYPHNPPQTAETGTTSSPESSSSADHGQASQSGDASQMDLEEPLLDWEQVDWFLGKDA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2667 263 MobiDBLite consensus disorder prediction 173 249 - -
Dere01g2667 263 MobiDBLite consensus disorder prediction 194 242 - -
Dere01g2667 263 SUPERFAMILY NAC domain 3 166 IPR036093 GO:0003677|GO:0006355
Dere01g2667 263 ProSiteProfiles NAC domain profile. 4 166 IPR003441 GO:0003677|GO:0006355
Dere01g2667 263 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 224 - -
Dere01g2667 263 Gene3D NAC domain 13 170 IPR036093 GO:0003677|GO:0006355
Dere01g2667 263 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2667 Dere-ChrDere01 41513168 41514961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2667 1 257 NAC Transcription Factor Family AT5G22380 48.855 3.74e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g2667 NAM 6.4e-32 No_clan