Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2659 ATGGCTGGAGATGAAGCGAAGCTTCAAGTCTCCACTCTCTCTCTCAATTCGCAACACTCAATGGCGGCGATCACAAGAATCATTGGGACCAGTTCTGCTTTGCCTCGCGCTTCACTTCTTTCTCCTGCTCTCCTCAGTTTTCGCAGGGCAATTGCTTACAAGCTTTTCGTTGGAGGACTATCATTCTTCACGACAGAGAAAGGATTGTCAGAAGCATTTTCTCAGTACGGTCAAGTTGTTGAAGCTAAAATTGTGATGGACAAGGTATCTGAGAGATCAAAAGGGTTTGGGTTTGTGACTTTTGCTTCAGAGCATGAGGCTGAGGATGCCATAGTAGGGATGAATGGGAAGGCACTAAATGGACGTGTTATCTTTGTCGATTATGCTAAACCCAAATCCAATATTGCTGATGCAATGCCTATTGCCAGAGGACCTCCTGAACCAACAGCAGACAATTAA 459 0.451 MAGDEAKLQVSTLSLNSQHSMAAITRIIGTSSALPRASLLSPALLSFRRAIAYKLFVGGLSFFTTEKGLSEAFSQYGQVVEAKIVMDKVSERSKGFGFVTFASEHEAEDAIVGMNGKALNGRVIFVDYAKPKSNIADAMPIARGPPEPTADN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2659 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
Dere01g2659 152 SMART rrm1_1 54 127 IPR000504 GO:0003723
Dere01g2659 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 124 IPR000504 GO:0003723
Dere01g2659 152 SUPERFAMILY RNA-binding domain, RBD 53 140 IPR035979 GO:0003676
Dere01g2659 152 Gene3D - 46 137 IPR012677 -
Dere01g2659 152 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 50 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2659 Dere-ChrDere01 41447577 41449521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2659 55 134 Eukaryotic Initiation Factors Gene Family AT1G49760 35.000 8.99e-08 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2659 01 41447577 41449521 Dere01g2659 01 41447577 41449521 ECH