Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2643 ATGGGGAAGAAAATGAAGCTGCCGTTTCTTGTGAAGAAGTCAGAGGTGAGGTCATCGTCTTCCTGGGGGTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACAGCACCCACTTCTTCGAACCCATCAACTCAGATTCCTCAGCAGGTGAAGGGGACCCAGTAGAGACCGTGGTTCGCGGCTTGCAGTCGGACCGGAGGCGGCTCTTCTTCGAGCCGGATGAGACTAGCTCCATATTAGAGACTAAAGCTTCTGTCCCAGGAGGCGTACCGTTCAAAGACAGCGTGGTGCTATCCATGAACTCTCAAGACCCTTACGTCGACTTTCGAGAGTCCATGAAGGAGATGGTGAAGGCTCATGCCCTCGAGCGCTGGGAGGCTCTCCAGGAACTTTTCTGCTGGTATTTGAGGGTCAATGCCAAAAGCAATCACGCCTATATTGTGGCTGCTTTTGTTGATTTATTGGTCGGCCTTGCATTTGCTTCTGCTTCTTCTTCTTCTTCTTCGCCCTCACCTTCTTCCCCTCTATCCTTTTCTACTTCTTCGCTGTCTTCTTCTTTTAGTACACGTTGTGTTAATTCTTCTTGTTTAGAAGCCGAGGAAGAGATCGACACTACTACTCCAACCTCATCTTCGTTCTCACAACAAGTTAAGGAGGATATTGATCATCGCGGCGAGGCCTCTTCTTCAAGTGCTTGA 708 0.5 MGKKMKLPFLVKKSEVRSSSSWGWPSCHQPRTLSFRANSTHFFEPINSDSSAGEGDPVETVVRGLQSDRRRLFFEPDETSSILETKASVPGGVPFKDSVVLSMNSQDPYVDFRESMKEMVKAHALERWEALQELFCWYLRVNAKSNHAYIVAAFVDLLVGLAFASASSSSSSPSPSSPLSFSTSSLSSSFSTRCVNSSCLEAEEEIDTTTPTSSSFSQQVKEDIDHRGEASSSSA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2643 235 NCBIfam uncharacterized plant-specific domain TIGR01568 100 162 IPR006458 -
Dere01g2643 235 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Dere01g2643 235 Pfam Transcriptional repressor, ovate 105 161 IPR006458 -
Dere01g2643 235 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 161 IPR038933 GO:0045892
Dere01g2643 235 MobiDBLite consensus disorder prediction 205 235 - -
Dere01g2643 235 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2643 Dere-ChrDere01 41241797 41242504 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere01g2643 Ovate 1.1e-22 No_clan