Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2642 ATGTCTAGCTCCAGAACGAAGCTTCTTTTAAACACTGTATCCGTCGACCTAGGATGCAGCAGCTGCAGGAAACCAAAGATTTCTCACATATTCCATCCCAAGTCAAAGCCAAAGAAGCCCACTAACCCAAAACACCGACTTCACAATCATTCTTCTTCGAGCTCCCTGGACAACGACAACACTACCACCACATTCTCTCCATACGGCGGTTCTTCTCAGTTTTCCGACGGCGACAACGGCGGGAAGGCCTCGAAGACGGTAAGAGGTTTGGGCAGAGTGGGGGGCGAAGGCGTGGCGGTGGAGAAAGATTCCGACGACCCTTATTTGGACTTTAGGCATTCCATGCTCCAAATGATATTGGAGAACGAGATTTACTCCAAGGACGATCTTAGAGAGCTTCTGAGTTGTTTTCTTCAGCTCAATTCGCCGTATCACCACGGGGTTATCGTCAGAGCTTTCAATGAGATCTGGAATGGGGTGCTTTCTGTGAGGTCCAATTCACCCAGGTTTCACTTCACTCGCAATTCACGTGACTCCTAA 540 0.4907 MSSSRTKLLLNTVSVDLGCSSCRKPKISHIFHPKSKPKKPTNPKHRLHNHSSSSSLDNDNTTTTFSPYGGSSQFSDGDNGGKASKTVRGLGRVGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLSCFLQLNSPYHHGVIVRAFNEIWNGVLSVRSNSPRFHFTRNSRDS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2642 179 MobiDBLite consensus disorder prediction 28 46 - -
Dere01g2642 179 NCBIfam uncharacterized plant-specific domain TIGR01568 98 158 IPR006458 -
Dere01g2642 179 ProSiteProfiles OVATE domain profile. 100 159 IPR006458 -
Dere01g2642 179 MobiDBLite consensus disorder prediction 28 88 - -
Dere01g2642 179 Pfam Transcriptional repressor, ovate 104 159 IPR006458 -
Dere01g2642 179 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 161 IPR038933 GO:0045892
Dere01g2642 179 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2642 Dere-ChrDere01 41228653 41229192 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere01g2642 Ovate 4.6e-23 No_clan