Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2592 ATGGAGGTTAGTGGGGCACCGCTTTCTGATGAAATTCTGATTCATCTAAAGCCTTATTTTATGTCGAGGACGACAGGAATAAAGTTCTTGTTTGCTGAACGCTCAGAACAGAAGAGTGACTCGTGTGAAATGGGTAACAACTGCGTTGGATCGAGAATCTCCAAAGATGCAGTATTTCTCACTATTCCCAGTTCACTTTGGTGGTCACGACCAACAGGAGATATGATTTCTCAACCCAGTAAACCATCATCCACACGTGAAGGTCAAAATGTTTCAGAGATTGTTCAACACAACCCACCAGAGGTAGTGAAAATCGATAAGGAAGAGACAAAACCAGAACAGGAGATGAAGCCACCTCAACCCAAAAAACAGGGCATTAAGATTAAAAATTCAGAGTCAATGGAGGAATCAAGACTACCCCAGTCGGTGACGGTGAGGCATAAGGAAGAAAGTGGATCAATTCCGACGAGAGTACATAAGCAAGAGATTGTTAAACCAGTGGAGCCTGCAAAACCGAAGAAGCCCCATAACATGAAGAGGCTTGCATCTGCTGGGCTTCAAGCAGAATCGGTTCTGCAAACAAAAACTGGTCATCTTAAGGAGTTCTATAATTTGGGGCGAAAGCTTGGACATGGGCAATTTGGGACGACTTTCTTCTGTGTGGAGAAAGCTACAGGTAAAGAGTATGCCTGCAAGTCCATTGCGAAGAGAAAATTGCTGACAAACGAAGATGTGGAGGATGTAAGGAGGGAGATTCAGATAATGCATCACTTGGCAGGGATCCCAAATATGATATCCATAAAAGGTGCTTACGAGGATGCTATTGCAGTTCATGCAGTGATGGAATTATGTGCAGGGGGTGAACTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAGACTTGCAAGGACAATAGTTAGTGTCGTAGAAGCTTGTCACTCCCTCGGAGTGATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTTAGTCAGGACGAAGACTCCCCCCTTAAGGCCATTGATTTTGGATTGTCTACATTTTTCAAACCAGGACAAACTTTCACAGACGTAGTGGGAAGTCCTTATTATGTAGCACCTGAAGTTCTGCGCAAGCGTTATGGCCCAGAAGCAGATGTGTGGAGTGCTGGTGTTATCATTTACATTCTGTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACGGAGCAAGATATTTTTACCGAGGTCTTGCATGGGGAGCTTGATTTCTCATCAGATCCTTGGCCTAAAATCTCTGAAGGTGCTAAAGACTTGGTCAGGAAGATGCTTGTTAGGGATCCAAGAAAACGGATTACTGCTCATGAAGTTCTTCGTCATCCTTGGATACAGGTTGATGGAGAAGCACCAGACAAGCCTCTTGATTCCGCAGTTCTGAGTCGCCTGAAGCAGTTTTGTGCCATGAACAAGCTCAAGAAAATGGCTATTAGAGTGATAGCGGAGAATCTCTCTGAAGAAGAAATTGCAGGATTGAAAGAAATGTTTAAGATGATAGACACAGACAGCAGTGGTCAAATTACTTTCGAAGAACTAAAAAATGGACTGAAAAAATTTGGTGCTAATCTCAGTGAATCTGAAATATACGATCTAATGCAAGCCGCAGATGTTGATAATAGTGGCACAATTGACTACAAGGAATTCATAGCAGCAACATTGCATTTAAACAAAGTTGAGAGGGAAGACCATTTAGTTGCAGCTTTTTCATACTTCGATAAAGATGGAAGTGGCTACATCACCCCGGACGAGCTTCAACAAGCATGCCAAGAATTAGGCATAGAAGATTTCCGCTTAGAAGAAATTATCCGAGAAGCAGATCAGGATAATGACGGGCAAATAGATTACAAAGAATTTGTGGCTATGATGCAGAGAGGCAATACAGAGTTGGGTCAAAAGGGTAGCAATAGTTTTAAGATTGGATATAGGGAAGCACTATCATTCTGTAAAATGGTTGATAGGTTGCTTCATGGCTTTGCCTTCTTATGTTCGTTATGA 2046 0.4257 MEVSGAPLSDEILIHLKPYFMSRTTGIKFLFAERSEQKSDSCEMGNNCVGSRISKDAVFLTIPSSLWWSRPTGDMISQPSKPSSTREGQNVSEIVQHNPPEVVKIDKEETKPEQEMKPPQPKKQGIKIKNSESMEESRLPQSVTVRHKEESGSIPTRVHKQEIVKPVEPAKPKKPHNMKRLASAGLQAESVLQTKTGHLKEFYNLGRKLGHGQFGTTFFCVEKATGKEYACKSIAKRKLLTNEDVEDVRREIQIMHHLAGIPNMISIKGAYEDAIAVHAVMELCAGGELFDRIVERGHYTERKAARLARTIVSVVEACHSLGVMHRDLKPENFLFVSQDEDSPLKAIDFGLSTFFKPGQTFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLSGVPPFWAETEQDIFTEVLHGELDFSSDPWPKISEGAKDLVRKMLVRDPRKRITAHEVLRHPWIQVDGEAPDKPLDSAVLSRLKQFCAMNKLKKMAIRVIAENLSEEEIAGLKEMFKMIDTDSSGQITFEELKNGLKKFGANLSESEIYDLMQAADVDNSGTIDYKEFIAATLHLNKVEREDHLVAAFSYFDKDGSGYITPDELQQACQELGIEDFRLEEIIREADQDNDGQIDYKEFVAMMQRGNTELGQKGSNSFKIGYREALSFCKMVDRLLHGFAFLCSL 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2592 681 ProSitePatterns EF-hand calcium-binding domain. 589 601 IPR018247 -
Dere01g2592 681 ProSitePatterns EF-hand calcium-binding domain. 623 635 IPR018247 -
Dere01g2592 681 ProSitePatterns Protein kinases ATP-binding region signature. 209 236 IPR017441 GO:0005524
Dere01g2592 681 SMART efh_1 508 536 IPR002048 GO:0005509
Dere01g2592 681 SMART efh_1 580 608 IPR002048 GO:0005509
Dere01g2592 681 SMART efh_1 614 642 IPR002048 GO:0005509
Dere01g2592 681 SMART efh_1 544 572 IPR002048 GO:0005509
Dere01g2592 681 CDD STKc_CAMK 202 460 - -
Dere01g2592 681 ProSiteProfiles EF-hand calcium-binding domain profile. 540 575 IPR002048 GO:0005509
Dere01g2592 681 MobiDBLite consensus disorder prediction 72 91 - -
Dere01g2592 681 SMART serkin_6 203 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2592 681 Gene3D Phosphorylase Kinase; domain 1 205 288 - -
Dere01g2592 681 CDD EFh 580 640 IPR002048 GO:0005509
Dere01g2592 681 ProSiteProfiles Protein kinase domain profile. 203 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2592 681 MobiDBLite consensus disorder prediction 107 134 - -
Dere01g2592 681 ProSiteProfiles EF-hand calcium-binding domain profile. 614 645 IPR002048 GO:0005509
Dere01g2592 681 SUPERFAMILY Protein kinase-like (PK-like) 202 462 IPR011009 -
Dere01g2592 681 FunFam Calcium-dependent protein kinase SK5 289 473 - -
Dere01g2592 681 ProSiteProfiles EF-hand calcium-binding domain profile. 504 539 IPR002048 GO:0005509
Dere01g2592 681 Pfam EF-hand domain pair 580 640 IPR002048 GO:0005509
Dere01g2592 681 Pfam EF-hand domain pair 521 571 IPR002048 GO:0005509
Dere01g2592 681 Gene3D - 486 645 - -
Dere01g2592 681 MobiDBLite consensus disorder prediction 107 155 - -
Dere01g2592 681 SUPERFAMILY EF-hand 500 641 IPR011992 -
Dere01g2592 681 Gene3D Transferase(Phosphotransferase) domain 1 289 485 - -
Dere01g2592 681 FunFam Calcium-dependent protein kinase 1 469 643 - -
Dere01g2592 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Dere01g2592 681 MobiDBLite consensus disorder prediction 141 155 - -
Dere01g2592 681 Pfam Protein kinase domain 203 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2592 681 ProSitePatterns EF-hand calcium-binding domain. 553 565 IPR018247 -
Dere01g2592 681 ProSiteProfiles EF-hand calcium-binding domain profile. 576 611 IPR002048 GO:0005509
Dere01g2592 681 FunFam Calcium-dependent protein kinase 1 205 288 - -
Dere01g2592 681 ProSitePatterns EF-hand calcium-binding domain. 517 529 IPR018247 -
Dere01g2592 681 PANTHER SERINE/THREONINE-PROTEIN KINASE 193 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2592 Dere-ChrDere01 40750034 40754489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2592 44 643 EF-hand Containing Proteins AT3G10660 68.530 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere01g2592 Pkinase 1.4e-71 CL0016