Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2581 ATGGCCGGATTCAATGTGATTGATGCTTGGCCATATATGACTCATGTACATGTGTCACAGATCCTGTACTTGTCACGAAAATTCAATTATATGGGGTACTTGATATTTGCTGTGAAGCACTGGGGTAATTTGCAGCTATCTCGTTCTCGAGGCCTCGTCTTCCACTTCGGCACTTCCTTTTTGGCCAGACCGTGGAGATCAGAAATGGAGAAAGCAAATTCATCTGGGTTAGCAAGAACCAAATCGGACCAGCTGGTGGAGACGGTGGTTGCAGCGCTGAAGTCAGCCCCGTCAAGTGAGTCAATTAACGGAATGCTGGACAGTGGTTCCAGCGGCGGCGGAGCAACACCGTCGAGGAAGTCAAGTCGACGGATGATGGCGGCGTCACCGGGGTGGAGCGGCGGCGGGAAAAACACTCACATTAGGAAGAGTAGGAGCGCTCAGATAAAGCTTGACTTGGACGATGTGGGTAGCGGCGCGGCACTTAGCCGAGCTTCAAGTGCCAGCTTGGGCCTCTCATTTTCCTTCACTGGCTTTACACTCCCTCCAGAAGAAACCGCAGACTTTAAGCCCTTCAGCGACGAAGATATTCCGGAGGATATTGAAGCTGGAACTTGCCAGCCAAGGTTTCAAACGGAACCCACTTTGCCGATTTATCTGAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAAGGCATGACAACAAGTGAGGAGAAGGATATCTTAAACAGGATTACTGGTTCTGTAAATCCAGGAGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACTCTTTTGAATCTGCTCGGAGGCAGGTTGATCCAGTCCACTGTTGGTGGCTCTATCACTTACAATGACCAACCATATACCAAATTCCTCAAAAGCAGGATAGGATTTGTAACTCAAGATGATGTTCTTTTTCCTCACCTTACTGTTAAAGAAACACTTACATACGCAGCCCGTCTACGACTCCCAAAGGCATTCACAAAGGACCAAAAGGAAAAACGAGCTTTGGATGTTATCTATGAGCTTGGCTTAGAAAGGTGCCAAGACACTATGATTGGTGGCTCCTTTGTTCGCGGGGTATCTGGAGGAGAGAGGAAGAGAGTTTGCATTGGTAATGAGATTATAATCAATCCTTCGCTTCTGTTTCTGGACGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTGAAGATTGTTCAGATGCTACATGACATAGCAGAGGCTGGTAAAACAGTAGTGACAACAATTCACCAACCATCAAGCAGACTCTTTCACAAATTTGATAAGTTGATTCTTCTGGGAAAAGGGAGCTTGCTTTACTTCGGGAAAGCATCAGAAGCAATGTCCTACTTCCAATCTATAGGATGTTCCCCTCTTATTACCATGAACCCAGCAGAGTTTTTGCTTGACCTCGCAAATGGAAACATAAATGATGTTTCTGTACCATCAGAGTTAGAGGACAAAGTGCAGATGGGAAATGCAGAAACTGAAACTAAGAGTGGGAAACCATCACCAGCAGTAGTACACGAGTATCTGGTAGAAGCATACGAGACTCGAGTTGCAGAAACAGAGAAGAAAAAGCTGATGGTCCCTATCCCCCTTGATGACTCACTGAAGTATAAGGTTTGCTCACCTAAAAGACAGTGGGGGGCAAGCTGGTGTGAGCAATTTTCTATACTGTTCTGCAGAGGAATAAAAGAACGAAGGCACGAATACTTCAGCTGGTTAAGAATCACCCAGGTTCTCTCCACTGCAGTCATCTTGGGATTACTTTGGTGGCAATCAGATGCTAACAATCCGGAGGGTCTTCAAGATCAGGCAGGGCTGCTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCTGTGTTCACAGCAATATTTACATTTCCTCAAGAGAGAGCGATGCTGGCGAAGGAGAGAGCAGTTGACATGTACAGACTAAGTGCATACTTCGTGGCTAGGACTACAAGTGACCTTCCATTGGACTTGATATTACCAGTACTGTTCCTGCTAGTTGTTTATTTCATGGCAGGTTTGAGATTAAGTGCCGACTCCTTTATATACAGTATTCTGACAGTCTTCCTCTGCATTGTAGCAGCTCAGGGACTTGGACTCGCTATTGGGGCCACACTAATGGACTTGAAGAGAGCAACAACTCTGGCTTCAGTAACAGTGATGACCTTCATGCTGGCGGGAGGATTTTTCGTGAAGGAAGTGCCGATATTCATATCGTGGATTCGGTACATGTCCTTTAACTACTACACGTACAAACTATTGCTGAAGGTGCAATATGAAGGCCTCACGCGAGGCATAAATGGAATGAGAATTGACAGTGGTAGGCCAGAGGTGGGTGCTCTGATAGCAATGGTTTTTGGCTATCGTTTATTGGCCTACCTTTCTCTGCGCCGGATGAAGCTTCATTGCGGAGCTTAG 2451 0.4627 MAGFNVIDAWPYMTHVHVSQILYLSRKFNYMGYLIFAVKHWGNLQLSRSRGLVFHFGTSFLARPWRSEMEKANSSGLARTKSDQLVETVVAALKSAPSSESINGMLDSGSSGGGATPSRKSSRRMMAASPGWSGGGKNTHIRKSRSAQIKLDLDDVGSGAALSRASSASLGLSFSFTGFTLPPEETADFKPFSDEDIPEDIEAGTCQPRFQTEPTLPIYLKFKDVSYKVVIKGMTTSEEKDILNRITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTVGGSITYNDQPYTKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKAFTKDQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMSYFQSIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAETETKSGKPSPAVVHEYLVEAYETRVAETEKKKLMVPIPLDDSLKYKVCSPKRQWGASWCEQFSILFCRGIKERRHEYFSWLRITQVLSTAVILGLLWWQSDANNPEGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSADSFIYSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKEVPIFISWIRYMSFNYYTYKLLLKVQYEGLTRGINGMRIDSGRPEVGALIAMVFGYRLLAYLSLRRMKLHCGA 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2581 816 MobiDBLite consensus disorder prediction 99 141 - -
Dere01g2581 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 458 IPR027417 -
Dere01g2581 816 SMART AAA_5 252 443 IPR003593 GO:0016887
Dere01g2581 816 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 220 466 IPR003439 GO:0005524
Dere01g2581 816 Gene3D - 219 460 IPR027417 -
Dere01g2581 816 FunFam ABC transporter G family member 22 230 460 - -
Dere01g2581 816 Pfam ABC-2 type transporter 423 484 IPR043926 GO:0140359
Dere01g2581 816 CDD ABCG_EPDR 217 448 - -
Dere01g2581 816 Pfam ABC-2 type transporter 561 770 IPR013525 GO:0016020|GO:0140359
Dere01g2581 816 MobiDBLite consensus disorder prediction 99 118 - -
Dere01g2581 816 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 196 804 - -
Dere01g2581 816 ProSitePatterns ABC transporters family signature. 366 380 IPR017871 GO:0005524|GO:0016887
Dere01g2581 816 Pfam ABC transporter 243 394 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2581 Dere-ChrDere01 40669465 40675842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2581 242 480 Calmodulin-binding Proteins AT2G36910 29.918 6.52e-16 80.9