Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2580 ATGGGCAACAACTGTGTAGGACCCAACGCTGGCGGGAATGGGTTCTTGCAATCTGTTTCAGCCGCTGTTTGGCGACCCCGGCCTGGGGACAGGCTTCCTCCGCCGAATGCCGCCATCAATGATGTAACTCCGGCATATGCAGGTCCCGATTCCTCTATAAATTCCATTGCTCCAGAAGATTCTGATCCTCCGGGCCCAGGTCAGAGTAAACCACCTGAAACGGTGAAGATTGCCAACGTCGAGCCGAAACCGCTGCAGGAGGAAAAGCCTCCAAAGCAGGAGGCTAATGATCCGCCGTCTGGTACAGCTGATGTTGCGAAAGCTAATAAACCCACTCATTATAAGAGGGTGTCCAGTGTTGGACTTAAAGTAGAATCGGTATTGGGAAGAAAAACTCAAAATTTGAAGGACGTTTATAGTCTGGGGCGGAAGCTAGGACAAGGGCAATTTGGGACGACATACTTTTGTCTAGAGAAGGCAACTGGAAAAGAGTTTGCTTGTAAATCGATTGCAAAAAGAAAATTGACAACTCAAGAGGATGTGGAAGATGTCAGAAGGGAGATTCAGATAATGCACCATTTGGCAGGTCACCCCAATGTGATAGAATTAGTTGGTGCTTATGAAGACGCCGTTGCTGTCAATCTTGTTATGGAACTTTGTTCTGGTGGGGAGCTTTTCGACAGGATCATACAGAGGGGACACTACACTGAGAGAAAGGCGGCTGAGCTCGCAAGGGTAATAGTCCGCGTTGTGGAGGCCTGCCATTCTTTGGGTGTCATGCACCGGGACCTGAAGCCAGAGAATTTTCTGTTTGTCAGCCCGGCAGAAGAATCACTTCTTAAGACGATAGATTTTGGACTCTCTGTGTTCTTTAGACCAGGTCAAACATTTACGGATGTGGTTGGGAGCCCGTACTATGTGGCCCCTGAAGTTCTGCGGAAGCACTATGGTCAAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATTTTACTATGTGGGGTTCCCCCATTTTGGGATGAGACGGAGCAAGGAATTTTTGAGCAAGTTTTGAAAGGAGAACTTGACTTTATCTCTGAACCATGGCCTAGCATATCTGAGAGTGCAAAGGATCTTGTCCGTAGAATGCTTATAAGGGACCCTAAGAAGAGGATGACAGCACATGAAGTCCTTTGCCACCCTTGGGTTCAGGTCGACAGCATTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTGTCTCGTTTGAAGCAGTTTTCTGCCATGAACAAGCTCAAAAAGATGGCCATCCGAGTGATTGCCGAAAGTCTGTCTGAGGAGGAAATTGGAGGGCTGAAAGAAATGTTCAAGATGATAGACGCAGATAATAGTGGACAGATTACTCTAGAGGAACTGAAAAATGGATTGGAGAGAGTGGGTGCCGATCTCAAGGAATCTGAAATTCTATGGTTGATGCAAGCAGCGGACATTGATAACAGTGGTACGATAGACTATGGTGAATTCATAGCAGCCATGCTTCATGTAAACAAAATTCAGAGGGAGGATCATCTATTTGCAGCTTTTAACTACTTTGACAAAGACGGGAGTGGGTACATTACACAAGATGAGCTTCAACATGCCTGTGAACAGTTTGGTCTGCAAGATGTTCATCTGGACGACATAATACGCGAAGTTGACCAGGATAATGATGGTCGAATTGATTACAGTGAATTTGTTGCAATGATGGAAGAGGTTGGTATTGGCAAAAAGGGACTACAAAATAGCATGAGTAAAATTGCGCATGCTTTCAAGAATCAATCTTTCAACATACGAGATTTACTGCTCCACCTTCTACCTTCGCTTCGTCCTTATGCTTTAGGCGGCAACTTCTTAGGTTCTCAACAAGCAGCATCATTTAATTAA 1902 0.4558 MGNNCVGPNAGGNGFLQSVSAAVWRPRPGDRLPPPNAAINDVTPAYAGPDSSINSIAPEDSDPPGPGQSKPPETVKIANVEPKPLQEEKPPKQEANDPPSGTADVAKANKPTHYKRVSSVGLKVESVLGRKTQNLKDVYSLGRKLGQGQFGTTYFCLEKATGKEFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIELVGAYEDAVAVNLVMELCSGGELFDRIIQRGHYTERKAAELARVIVRVVEACHSLGVMHRDLKPENFLFVSPAEESLLKTIDFGLSVFFRPGQTFTDVVGSPYYVAPEVLRKHYGQECDVWSAGVIIYILLCGVPPFWDETEQGIFEQVLKGELDFISEPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVDSIAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAESLSEEEIGGLKEMFKMIDADNSGQITLEELKNGLERVGADLKESEILWLMQAADIDNSGTIDYGEFIAAMLHVNKIQREDHLFAAFNYFDKDGSGYITQDELQHACEQFGLQDVHLDDIIREVDQDNDGRIDYSEFVAMMEEVGIGKKGLQNSMSKIAHAFKNQSFNIRDLLLHLLPSLRPYALGGNFLGSQQAASFN 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2580 633 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Dere01g2580 633 SUPERFAMILY EF-hand 437 576 IPR011992 -
Dere01g2580 633 Gene3D Transferase(Phosphotransferase) domain 1 225 421 - -
Dere01g2580 633 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Dere01g2580 633 CDD STKc_CAMK 138 396 - -
Dere01g2580 633 SUPERFAMILY Protein kinase-like (PK-like) 139 398 IPR011009 -
Dere01g2580 633 Gene3D - 422 579 - -
Dere01g2580 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 131 571 - -
Dere01g2580 633 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Dere01g2580 633 ProSiteProfiles EF-hand calcium-binding domain profile. 512 547 IPR002048 GO:0005509
Dere01g2580 633 ProSiteProfiles Protein kinase domain profile. 139 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2580 633 FunFam Calcium-dependent protein kinase SK5 225 409 - -
Dere01g2580 633 ProSitePatterns EF-hand calcium-binding domain. 559 571 IPR018247 -
Dere01g2580 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Dere01g2580 633 Gene3D Phosphorylase Kinase; domain 1 141 224 - -
Dere01g2580 633 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Dere01g2580 633 FunFam Calcium-dependent protein kinase 1 405 579 - -
Dere01g2580 633 Pfam Protein kinase domain 139 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2580 633 Pfam EF-hand domain pair 515 576 IPR002048 GO:0005509
Dere01g2580 633 Pfam EF-hand domain pair 445 505 IPR002048 GO:0005509
Dere01g2580 633 SMART serkin_6 139 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2580 633 FunFam Calcium-dependent protein kinase 1 141 224 - -
Dere01g2580 633 ProSitePatterns EF-hand calcium-binding domain. 525 537 IPR018247 -
Dere01g2580 633 ProSiteProfiles EF-hand calcium-binding domain profile. 550 581 IPR002048 GO:0005509
Dere01g2580 633 Coils Coil 462 482 - -
Dere01g2580 633 CDD EFh 445 505 IPR002048 GO:0005509
Dere01g2580 633 CDD EFh 516 575 IPR002048 GO:0005509
Dere01g2580 633 ProSitePatterns Protein kinases ATP-binding region signature. 145 172 IPR017441 GO:0005524
Dere01g2580 633 MobiDBLite consensus disorder prediction 21 112 - -
Dere01g2580 633 SMART efh_1 550 578 IPR002048 GO:0005509
Dere01g2580 633 SMART efh_1 516 544 IPR002048 GO:0005509
Dere01g2580 633 SMART efh_1 444 472 IPR002048 GO:0005509
Dere01g2580 633 SMART efh_1 480 508 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2580 Dere-ChrDere01 40656565 40662818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2580 1 588 EF-hand Containing Proteins AT2G38910 74.579 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere01g2580 Pkinase 1e-74 CL0016