Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2576 ATGGGTTCCCTTCCCCACATAGTAGAGGACTGCATGGGTTTCCTCCAACTCTATAGCGATGGCTCCATTTTGCGTTCCAATGACATAAAATTCAAAGATTCACCCGTTGAAGACCACTCTGTGCTGTTCAAAGACTCTCTCTTTCACAAAACTTTCGATCTTTATCTTCGTATTTACAAACCCCAACCATCCTCTGCTTCTGATCACAGCAAAATGCCTCTTCTAATGTTCTTTCATGGCGGAGGCTTCTGCTTCGGCTCACGCGTCTGGCCTCACACTCACAACTGTTGCGTCCGCCTCTCTTCGGGGCTCCGAGCGGTCGTGGTGGCTCCTGACTACCGCTTGGCGCCGGAACACAGGCTGCCGGCGGCGTTGGATGACGCTGTGGAGGCAGTGAGGTGGATTCAGGAGCAGGCGTTGATGAGTGAGGATGCATGGTTGAATGGTGACGTTGACTTTGACCGAGTGTTCATTGTGGGTGACTCATCTGGCGCGAATATTGCGCATCATTTGGCGGTTCGGTTTGGATCCGAAAGTGGAGATACGGATCCGATTCGGGTTCGAGGATATATACTGTTGGCGCCATTTTTCGGTGGGGAAGTTAGAACCGAGTCCGAGGAGGGACCCCGAGAAGAAATTCTGAGCCTTGAATTACTTGACAGATTTTGGAGGCTTTCAATGCCTGTTGGAGAGAACAGAGACCACCCATTGGCTAACCCCTTTGGTCCTCTCAGTCCAGATCTTGGACAAGTGAAGCTTGACCCTATTTTGGTGATCTTAGGAGGCAAAGAATTACTGAAGGATAGGGCAGCAGAATATGCAAGAAGGCTAAAAGAACTGGGCAAGAATATTGAGTACGTTGAATTTGAGGGAAGAGAACATGGCTTTTTCACCCATGATTCCTACTCTGATGTTGCAGAAGAGGTCCTGCATATCATTCAACGATTCATGTTTCAAAATTCTACTTAG 969 0.4871 MGSLPHIVEDCMGFLQLYSDGSILRSNDIKFKDSPVEDHSVLFKDSLFHKTFDLYLRIYKPQPSSASDHSKMPLLMFFHGGGFCFGSRVWPHTHNCCVRLSSGLRAVVVAPDYRLAPEHRLPAALDDAVEAVRWIQEQALMSEDAWLNGDVDFDRVFIVGDSSGANIAHHLAVRFGSESGDTDPIRVRGYILLAPFFGGEVRTESEEGPREEILSLELLDRFWRLSMPVGENRDHPLANPFGPLSPDLGQVKLDPILVILGGKELLKDRAAEYARRLKELGKNIEYVEFEGREHGFFTHDSYSDVAEEVLHIIQRFMFQNST 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2576 322 Coils Coil 263 283 - -
Dere01g2576 322 Gene3D alpha/beta hydrolase 15 321 IPR029058 -
Dere01g2576 322 SUPERFAMILY alpha/beta-Hydrolases 4 317 IPR029058 -
Dere01g2576 322 PANTHER ARYLACETAMIDE DEACETYLASE 12 297 - -
Dere01g2576 322 Pfam alpha/beta hydrolase fold 75 297 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2576 Dere-ChrDere01 40610353 40614692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2576 7 311 Carbohydrate Esterase AT5G16080 35.783 1.79e-61 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2576 01 40610353 40614692 Dere01g2576 01 40610353 40614692 ECH