Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2559 ATGGCAACTGCAACATACCCGCCACCACCACCCTATTACAGACTCTACAAAGATTACTTACAAGACCCGAAATCAGCTCCTGAGCCTCCTCCTCCTATAGAAGGGACTTACGTTTGTTTTGGAGGCAATTACACTACTGATGACATTCTACCAAGCTTGGAAGAGCAGGGCGTGCGCCAGCTTTATCCTAAGGGCCCTAATGTTGATTTTAAGAAGGAGCTGAGATCACTTAATGGAGACTTGCAGCTACACGTTTTGGAGCTTGCTGATATTCTCATCGAGAGACCATCACAGTATGCAAGGAGAGTTGAAGAAATATCTCTTGTATTCAAGAACTTGCATCACCTTCTAAATTCATTGCGTCCTCATCAGGCAAGAGCAACATTAATTCACATTTTGGAACTTCAGATACAGCGCCGCAAACAAGCGGTGGAGGACATAAAGAGAAGGAGAGAGGAAGCACGAAAACTTCTTAATGAGGCCCTGGCTACCCTAGATGGCCATTAG 507 0.4517 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGNYTTDDILPSLEEQGVRQLYPKGPNVDFKKELRSLNGDLQLHVLELADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARKLLNEALATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2559 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Dere01g2559 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Dere01g2559 168 Coils Coil 130 168 - -
Dere01g2559 168 Gene3D - 63 159 IPR044888 -
Dere01g2559 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Dere01g2559 Med7 1.4e-42 No_clan