Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2555 ATGTCACACTCACTGTGTAGGCGTTGGAGCAGGTTGCTTTCTCCATTTAAAATAGCAAATTGCGGAAAGAGACTTCAACTCTTGGCATTCCCATTTTCCACTGCATCGGAGGAGCATGATAATCCGAGTCGACCCGGTCCGCCTCCGATTCGAGTGGGCATCACCGAGTCAGCTGGGCGTGGCGTATTCGCCACGCGGAAAATCGGAGCCGGAGATCTCATCCACACCGCCAAGCCCTTGGTGTGCCACCCTTCGCCCGCTGCTATTCACACTGTTTGTTACTTTTGCCTTAGAAGGCTCCGAAATTCGGCCAACCCTGAAGCTGCTGGTGTATCATTTTGTAGTGAAGAATGCAAAGAACGTTCTAAGGAGTTTTATGATGTTGAGATGAAAGCGAATTGGATGGCTTTTGATGACTATTGCCGGGCCTATGGTTTGAAATATCCATTTCTGGTAAAGCGGTTGGCTTGCATGATCATATCAGGAGTTGCCAGTATTGACAGTCTTGACATTCTTCAACCTGCAAGTTTGACTCCTGAGATGATATTAAAGATGGAAGAGGGTTTTGACCTGTTAAGGAATGCCTTCACGAAGACACTTATTGCAGATGAAAATATTACTTTTCTAAGCAAGGAATGGTACATTAGTGTTCTGGCACGAATCCGTATTAATGCATTTCGAGTTGATCTACCTGGAGGTTTGTATGAAGATCTCCTTTCATCGGCAGTTGCATCTGTAGAAGCTGAAGCTGCTGTTGGAAATGCTGTCTATATTCTTCCATCTTTCTACAATCATGACTGTGATCCTAATGCACATATTATATGGATAGATAACGCAAATGCAAAAATGAAGGCCCTCCGTAACGTTGAGGCAGGTGAAGAACTCAGAATCTGCTACATTGATGCCAGCCTGGACCGTGATGCTCGGCAAGAACTATTGCTTCGAGGTTTTGGTTTTCACTGCACTTGCAATAAATGCTTACATGGCGACTAA 993 0.4512 MSHSLCRRWSRLLSPFKIANCGKRLQLLAFPFSTASEEHDNPSRPGPPPIRVGITESAGRGVFATRKIGAGDLIHTAKPLVCHPSPAAIHTVCYFCLRRLRNSANPEAAGVSFCSEECKERSKEFYDVEMKANWMAFDDYCRAYGLKYPFLVKRLACMIISGVASIDSLDILQPASLTPEMILKMEEGFDLLRNAFTKTLIADENITFLSKEWYISVLARIRINAFRVDLPGGLYEDLLSSAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDNANAKMKALRNVEAGEELRICYIDASLDRDARQELLLRGFGFHCTCNKCLHGD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2555 330 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 328 - -
Dere01g2555 330 SMART set_7 48 306 IPR001214 GO:0005515
Dere01g2555 330 CDD SET_SMYD 253 326 - -
Dere01g2555 330 SUPERFAMILY SET domain 48 324 IPR046341 -
Dere01g2555 330 Gene3D SET domain 61 326 IPR046341 -
Dere01g2555 330 ProSiteProfiles SET domain profile. 48 300 IPR001214 GO:0005515
Dere01g2555 330 Gene3D - 144 225 - -
Dere01g2555 330 Gene3D - 92 143 - -
Dere01g2555 330 Pfam SET domain 59 299 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2555 Dere-ChrDere01 40381777 40384943 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere01g2555 SET 2.3e-14 No_clan