Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g2539 | ATGGACAAGTCTGACAGAGAGACCCTTGACTTCATGAACGTTCAGTCTTTCTCTCAACTCCCTTTCATCCGACCTCCGCCTCTCAAAGAAAAGCCCGTTAAGCTTTTCGGCATTGAATTCCCCAACTCGGACTCACCTTCCGCCCCTGACGACGCCGACTCAGCCGAAACAGCTAACAATAATGCTTTCGACCTTGATAACAAGGACAGCACAGCCACCGCCGACAACGGCGAGAGTAGCCGCCGGTTCGAATGCCATTACTGTTGTAGAAACTTCCCCACTTCTCAAGCCTTAGGCGGCCACCAAAACGCCCATAAACGAGAGCGTCAGCACGCCAAACGAGCCCACCTTCAGTCGGCTATGGTGCACAATGGCCTCTCCGTGGACGCCGCCCAAGTCTACGGCCTCATGAACTACCGGCTCGGCTCGGCTCCCGCGCAGCCAATATCTTATCCGACGTGGCATAATAGTAACTCGAGCAGTGGAAGGCTTTATGGAAGCCATGGTGCTAGTTCCTATCCTCATCTGCAACCCATCAATGGTAGCCCCTTGGCCTTGTGGCGAATCCCCACCGTCCAAAGTAACCCTACTGCTTTGAACCGTGACCGTTCGTTGCACTTACAGCATCCATTGCCCTTGTTTGCTGGCGACGAAATCAACGTCAGGACTTCGCCGGTTGTCGTGTCCGCTTCGCAAAATCGGCTTGTCTATGATTCTAAACCCACCGTCCAAGACCATGTGAGTTTGGATCTTCATCTGTAA | 762 | 0.5328 | MDKSDRETLDFMNVQSFSQLPFIRPPPLKEKPVKLFGIEFPNSDSPSAPDDADSAETANNNAFDLDNKDSTATADNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNGLSVDAAQVYGLMNYRLGSAPAQPISYPTWHNSNSSSGRLYGSHGASSYPHLQPINGSPLALWRIPTVQSNPTALNRDRSLHLQHPLPLFAGDEINVRTSPVVVSASQNRLVYDSKPTVQDHVSLDLHL | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g2539 | 253 | Gene3D | Classic Zinc Finger | 61 | 133 | - | - | |
Dere01g2539 | 253 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 83 | 110 | IPR013087 | - | |
Dere01g2539 | 253 | MobiDBLite | consensus disorder prediction | 47 | 77 | - | - | |
Dere01g2539 | 253 | SUPERFAMILY | beta-beta-alpha zinc fingers | 80 | 111 | IPR036236 | - | |
Dere01g2539 | 253 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 85 | 105 | IPR013087 | - | |
Dere01g2539 | 253 | PANTHER | ZINC FINGER PROTEIN GIS | 1 | 253 | IPR044291 | GO:0003700|GO:0009739|GO:0010026|GO:0010090 | |
Dere01g2539 | 253 | MobiDBLite | consensus disorder prediction | 36 | 77 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g2539 | Dere-ChrDere01 | 40246267 | 40247028 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g2539 | 1 | 253 | C2H2 Transcription Factor Family | AT3G58070 | 40.441 | 2.64e-47 | 155 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere01g2539 | 01 | 40246267 | 40247028 | Dere02g1320 | 02 | 12703494 | 12704216 | CCT | |
Dere01g2539 | 01 | 40246267 | 40247028 | Dere01g2539 | 01 | 40246267 | 40247028 | ECH |