Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2531 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAAAGCAGTGGCCCACCTGCAAACCAATACACTGCACCACTCAGAGGTAGTAATGCATACGGTGAAGGAGGTGACAGAGGAGAGCCAAAAAGCAATATTGTCAAGAGTGGTGCTCCCCCGAAAGTATTGCCAATTGAGACCCCCGCAATACAGTTGGATGAATTAAATAGGTTAACGGACAACTTTGGCTCAAATGCTTTGATTGGAGAAGGTTCATACGGACGAGTTTTTTATGCAAAGTTAAGCGATGATCAGGATGCAGCAATCAAGAAGCTGGACACCAGTGGTTCTTCCCCCGAAGAAGACGCCGATTTTGCAGCTCAGTTATCTATCGTTTCAAGACTGAAGCATGAAAACTTTGTGGAGTTGATTGGATATTGTCTCGAGGCAAGTAACAGAATTTTGGTGTATCAACATGCAACTTTGGGTTCCTTGCATGACGTGTTACATGGGAGGAAAGGCGTACAAGGGGCTGAGCCGGGTCCAGTTCTAAGCTGGAACCAGAGAGCAAAAATTGCACTTGGAGCAGCAAAAGGCCTCGAGTTTCTTCATGAAAAGGTTCAACCTTCTATAGTTCATCGTGATATTAGATCCAGCAATGTCTTACTGTTCGGTGACTATGATGCCAAGATTGCCGATTTCAGCTTGACAAGTCAGTGTTCTGACACAGCAGCTCGCCTGCATTCAACAAGAGTCTTGGGAACGTTTGGCTACCATGCTCCAGAGTATGCCATGACAGGTCAGATAACCCAGAAAAGCGATGTTTACAGTTTCGGAGTTGTGCTCTTAGAACTCTTGACAGGAAGAAAACCAGTAGACCACACAATGCCCAAAGGCCAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTGGATCCCAAACTAAACAATGAGTACCCGCCAAAGGCAATTGCTAAGTTGGCAGCGGTTGCAGCACTGTGTGTTCAGTATGAGGCAGACTTCCGACCTAACATGACCATTGTTGTGAAAGCTCTGCAACCACTTCTCAATGCAAAACCAGCTGGCTCAGAACCCAGTGCTTAA 1098 0.4654 MLCCGGAEEESSGPPANQYTAPLRGSNAYGEGGDRGEPKSNIVKSGAPPKVLPIETPAIQLDELNRLTDNFGSNALIGEGSYGRVFYAKLSDDQDAAIKKLDTSGSSPEEDADFAAQLSIVSRLKHENFVELIGYCLEASNRILVYQHATLGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIALGAAKGLEFLHEKVQPSIVHRDIRSSNVLLFGDYDAKIADFSLTSQCSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGSEPSA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2531 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Dere01g2531 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 358 - -
Dere01g2531 365 SMART tyrkin_6 71 350 IPR020635 GO:0004713|GO:0006468
Dere01g2531 365 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
Dere01g2531 365 SUPERFAMILY Protein kinase-like (PK-like) 50 350 IPR011009 -
Dere01g2531 365 MobiDBLite consensus disorder prediction 1 49 - -
Dere01g2531 365 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Dere01g2531 365 FunFam Pti1 kinase-like protein 47 148 - -
Dere01g2531 365 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
Dere01g2531 365 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Dere01g2531 365 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2531 365 Gene3D Transferase(Phosphotransferase) domain 1 150 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2531 Dere-ChrDere01 40151738 40153603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2531 61 364 Receptor kinase-like Gene Family AT3G58690 45.246 1.59e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dere01g2531 PK_Tyr_Ser-Thr 8.4e-45 CL0016