Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2509 ATGGCTAGAATGGTGAAATATGAATTGGACGCTAGCAATCTTGAATCTGAAGCGCCCGCCACCACCGCCCCTGCTTCACAAAGTAACGATGACCGTAGAGTTCTTCGTTCTCGCTACCTGGTCGTGGAGAGCCTCATTCACGATGAAAGGGAAGACATTGTAAGACCTAACTCTGATAAGTTTGATTTGATCTTTAATGAAGTGGAGACCTTACATCAGCTAGTTAGAAAACCCAGCGAACAAGTGGCTGATGCAAAGGCTCTTCTGGACATTACGAAGAGCTTGTTATCGTCTGTGAAAGCTCACAACAATGATGGACTAACTCCTTCGGACTTCATCTTGTGTATTCTTAACGAATTTGGGGAACAACGTGGATTAAGTACAGGCGTCGTGGATCGCAGGAACTTGGTATTTTGGAAGGATATTGGAGTTGCAGTCTCGTGTGTTTTTAAAGGAGGTCCTGGGTGCTACACCATGATTGGCCCTATGGATGCTGAAATAAATCAGAGGAAGACGGTTAATCGAAGAAAGCGAATGAGACCCACACAAATTGCACGGCCAGAAGAGCTAGATGATTGTTCGAGGGAAAAGAGGACCGATACTGATGAAAACATGTTAACTATGTTTAATATCTTGAGGAAAAACAGAGTTGTCAGGCTTGAAAATTTAATATTGAATAGGAACTCTTTTGCACAGACGGTGGAGAATTTATTTGCTCTGTCATTTTTAGTCAAAGATGGAAGGGCGGAAATAAAAGTGAATGAGACTGGATGGCATCTCGTTTCACCAAGAAACGCTCCTGCGGCAAATAAAGTTCTTTCTGGGGACGTTACTTACAGCCACTTTGTATTCAGATTTGACTTCAAGGACTGGAAGTTGATGGCTCGTTCTGTTGGAATTGGTGAGGAGCTGATGCCACACAGGAATAGTCAATCACTATCTGGTTCCCCAGCAGCAACTGCTCAGGATGGACTATCATGCACCAGAAAAGGTTAA 996 0.4357 MARMVKYELDASNLESEAPATTAPASQSNDDRRVLRSRYLVVESLIHDEREDIVRPNSDKFDLIFNEVETLHQLVRKPSEQVADAKALLDITKSLLSSVKAHNNDGLTPSDFILCILNEFGEQRGLSTGVVDRRNLVFWKDIGVAVSCVFKGGPGCYTMIGPMDAEINQRKTVNRRKRMRPTQIARPEELDDCSREKRTDTDENMLTMFNILRKNRVVRLENLILNRNSFAQTVENLFALSFLVKDGRAEIKVNETGWHLVSPRNAPAANKVLSGDVTYSHFVFRFDFKDWKLMARSVGIGEELMPHRNSQSLSGSPAATAQDGLSCTRKG 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2509 331 PANTHER UNCHARACTERIZED 16 312 IPR027786 GO:0005634|GO:0006281|GO:0030915
Dere01g2509 331 Pfam Nse4 C-terminal 218 305 IPR014854 -
Dere01g2509 331 MobiDBLite consensus disorder prediction 307 331 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g2509 Dere-ChrDere01 39871951 39874614 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2509 31 310 Non-SMC Element family AT1G51130 55.160 1.95e-108 320