Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2499 ATGAATGCACCTCTTCTGTATTTTGATGTTTCTGCTTCGTCTTTTCTTACACTCAGGCCTCCATCAGATTGGTGTTTAACTGTTTACTTAGTCTCTGGGCCATTGAAGGTTTTGTTACACTCCCTCACCGTCTCCCTGAACTCGGGGATGTTCGCGGTCGGAGACATGGGTGAATCGGGTAACGAGGAAAGCAGAAACGGAGCACAAGGGGAAGAACAAGATGAAGACTACATGGGGGATCTCTCTCATTTTCTTCCTTCGGAAGCTTTTGGTCCTTCTGAGTCTTTGACCAGAAAGGTCTCTAACACGAAAACCCCCACGGTCAACTCTTCCAAGAAGCAGCTGAAGACTCTTAGCTGGCAAGAACGACGAAAACTCGAAAGACAAAAAAAACAACAAGAAGAGGATGAGCAAACATTAGCAAAAGTGGAAGCTCCAATACCGCAATCAAACATTGGATTTAAGCTGCTCAAACAAATGGGTTATATGCCAGGCACTGCCCTTGGAAAGGAGGGTTCAGGCAGGGCTGAACCTGTGGGACTTGATATACGACGGTCACGAGCTGGTATAGGCCTAGATGATCCCCACAAGGAAAAGAGGAAAAGGAAGGAGATTAAGACAGAGAGGAAAAAGAGGAAAGAAGAGGCTCTAATGGAAGAATTTGGGTCAAGGCAAAAGTCACAGTGGCGGAGTAGGAGAGTTGTACTCAATTTCAAAAAGGCAAAGGCTGCTCTTGATCAATTAGAGAACAGGGAAGTCATAGTACCAAAGAAGACTGATGATGAGGAGGAGGGTGATGTTGAAGGAGAGGATGAGGAAGAAATAACTGAAGAGGATTTGCAGGATGTTTTGATGAAACTGAGGGATGAGCATCAATATTGCCTCTTTTGTGGATGTCAATATGAAACAAGGGATGCCCTTTGGGCTAACTGCCCCGGGACCAATGAAGATGACCACTAA 960 0.4542 MNAPLLYFDVSASSFLTLRPPSDWCLTVYLVSGPLKVLLHSLTVSLNSGMFAVGDMGESGNEESRNGAQGEEQDEDYMGDLSHFLPSEAFGPSESLTRKVSNTKTPTVNSSKKQLKTLSWQERRKLERQKKQQEEDEQTLAKVEAPIPQSNIGFKLLKQMGYMPGTALGKEGSGRAEPVGLDIRRSRAGIGLDDPHKEKRKRKEIKTERKKRKEEALMEEFGSRQKSQWRSRRVVLNFKKAKAALDQLENREVIVPKKTDDEEEGDVEGEDEEEITEEDLQDVLMKLRDEHQYCLFCGCQYETRDALWANCPGTNEDDH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2499 319 SMART G-patch_5 147 193 IPR000467 GO:0003676
Dere01g2499 319 MobiDBLite consensus disorder prediction 208 223 - -
Dere01g2499 319 MobiDBLite consensus disorder prediction 117 140 - -
Dere01g2499 319 SMART DUF4187_2 261 319 IPR025239 -
Dere01g2499 319 MobiDBLite consensus disorder prediction 94 116 - -
Dere01g2499 319 MobiDBLite consensus disorder prediction 89 140 - -
Dere01g2499 319 Coils Coil 231 251 - -
Dere01g2499 319 Coils Coil 123 143 - -
Dere01g2499 319 PANTHER UNCHARACTERIZED 72 319 IPR039249 -
Dere01g2499 319 Pfam G-patch domain 149 192 IPR000467 GO:0003676
Dere01g2499 319 MobiDBLite consensus disorder prediction 189 223 - -
Dere01g2499 319 Pfam Domain of unknown function (DUF4187) 270 319 IPR025239 -
Dere01g2499 319 ProSiteProfiles G-patch domain profile. 149 195 IPR000467 GO:0003676
Dere01g2499 319 MobiDBLite consensus disorder prediction 257 277 - -
Dere01g2499 319 MobiDBLite consensus disorder prediction 263 277 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2499 141 191 C2H2 Transcription Factor Family AT5G26610 43.137 3.90e-06 45.8