Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2498 ATGGTTTGCAAGTGCTATTATCAGCATCTCTCTATCATTATCTTCTCGGCAATTTTGGCATCTCGTGGTTTAGCAGATACTGATCCAGCTGACGCAGTCACAGCTCTCCAAGATCTATATGGGACCTTGAACCAGCCACCCGTGCTGAAAAGTTGGAATCTTAATGATCCTTGTGGGGAATCTTGGACAGGAGTAGCATGTGCTGGGTCATCAGTCATACAACTCAAAATTCAAGGATTGAATCTCACTGGGCATCTTGGAAGCCAGCTCCAGAATCTACAGAATTTGAAGCATCTTGATGTCAGCTCTAATAACATAAAGGGTGAAATACCATTTGGCTTACCCCCCAATGCCACGCATATAAATATGGCTTGCAACTATTTGGGCCAAAATATTCCCCACTCATTACCTATCATGAAAAAACTACGGCATCTGAATCTGAGCCACAATTTCTTATCAGGACCCATAGGCAATATTTTTACTGGCCTAAATAATCTCAAAGAGATGGACCTTTCATATAACAATTTCACCGGAGATCTACCTAGTTCATTTGGTTCCTTGAAAAACCTGTCTAGATTGTTCTTGCAAAATAATGGTTTCACTGGATCGGTTACGTATCTTGCTGAACTTCCACTTATAGATTTGAACATTCAAGATAATCAGTTTAGCGGTATTATTCCTCAGCATTTTCAATCCATATCAAATTTATGGATCGGCAGAAATAAATTCCACGCAGAAGGCAATTCTCCTCCCTGGGATTTTCCTTTGAACAGTATGCCAGTTGTGCATAATATTAGTCTCCCGCCTACGGCTCAGGCTCAGGCAAATGCCATCGAGAACTTTTCCTCTCACAAAGTAAGTGGGCACAAGAAGAGACGTATGAGTCCTGGAGGAATAGCTTTTACGGTTGGAGGAGGGACATTATTGGCTACAGGACTGGCACTCTTCATTGCAATCCGTTTGAGTCGACTGAATGAACAGAGACTGAAAAGCTTGGAAAGCAGCCATAGCTCATTGCAATCTCATCCAACTACTGCAACCATAGAAGTCTCTTCCACTGCACTAGAAGAAAGCCCGCGAACCCCGCCATTTAATTCTACATCCCTCCTAGGTCCAAGGCGATTACCTCCCCTGCAACATAACAGAAGAGAGGACATGTCAAGGAGAAGTTTTTCCAAAAGATGCAGATTATCTGGAAGGACGAAAGTTTACACTGTAGGAGAGCTTCAGTTAGTTACAAACAGCTTCGGTGAGGATAACTTTCTCGGAGAGGGATCTCTCGGTCCTGTTTATAGAGCTATGTTTCCAGATGGCCAAACTTTGGCTGTGAAGAATATCAACATGGCGGGCCCGTCTTTCCGTGACGAGGAAAAGTTTTTGGATGTCGTTTCCACCGCTTCCCGTCTGAGGCACCCCAACATCGTTGCGCTTAACGGCTATTGTTTGGAGCACGGGCAGCATCTTCTTGTTTACGATTATGTTAGAAATTTAACACTGGACGATGCTCTTCACAGTGATGCATACAAGCCTTTATCGTGGGTCCTCCGTCTCCAGATTGCCCTTGGTGTTGCTCAGGCGCTGGACTATTTGCACTCTACGTTCTCCCCTCCTGTCGCCCACGGCAACTTGAAGGCTGCCAATATCCTACTTGACGAAAATCTGATGCCTTGTGTCTGTGACTGTGGCCTAGCTATTCTGAGACCGCTGACAAGCAACCAGGTAAATTCCTGCCTGAAACAGCTTCATGTTGAAATAAATGGTATTTTGGTAGATGAGGAGGCTCTCTTGGTCAAAGTCATAGTTCTTTATCCCAAAGATTTTGTCAGTCAGATGTTGCAAAATGAACCAGAAGCTGATCACTTTGGTGACTGTTGGAAACAGGGTTCTGAAATTGCAAGAGAAGACGCAGGCTACATTGCACCTGACCATGGCCAACTAGAAATTGGCAACACAAACAGTGACGTCTATGCCTTTGGGGTGTTGCTTCTGGAATTATTGACGGGAAGGAAGCCTTTCGATGATTCGAGGCCAAGGGAGGAACAATTTCTGGCAAAATGGGCATCATCGAGGCTTCATGATAACGAGAGTTTGGAACAGATGGTGGACCCTGGAATTCAAAAGACAGTTTCAACCAAGGCTCTTTCTCGTTATGCTGACATAGTCTCCCTCTGCATACAGCCTGTGAAGGAATTTCGGCCTTCAATGTCAGGAGTGGTTGACTCTCTTATATCTTTTTCAAAAATGCTCAACACGGGCATGCCAAAGAGTGGTGCTGTAGCAGCAGATGGTGCTGACTTTGATACACTTGACAGGTCTTTCCGTTCAACCAACACTCGCTTTATGGGTTCACCCGCTTTGAGCTATGTATCCGCCTGA 2376 0.4474 MVCKCYYQHLSIIIFSAILASRGLADTDPADAVTALQDLYGTLNQPPVLKSWNLNDPCGESWTGVACAGSSVIQLKIQGLNLTGHLGSQLQNLQNLKHLDVSSNNIKGEIPFGLPPNATHINMACNYLGQNIPHSLPIMKKLRHLNLSHNFLSGPIGNIFTGLNNLKEMDLSYNNFTGDLPSSFGSLKNLSRLFLQNNGFTGSVTYLAELPLIDLNIQDNQFSGIIPQHFQSISNLWIGRNKFHAEGNSPPWDFPLNSMPVVHNISLPPTAQAQANAIENFSSHKVSGHKKRRMSPGGIAFTVGGGTLLATGLALFIAIRLSRLNEQRLKSLESSHSSLQSHPTTATIEVSSTALEESPRTPPFNSTSLLGPRRLPPLQHNRREDMSRRSFSKRCRLSGRTKVYTVGELQLVTNSFGEDNFLGEGSLGPVYRAMFPDGQTLAVKNINMAGPSFRDEEKFLDVVSTASRLRHPNIVALNGYCLEHGQHLLVYDYVRNLTLDDALHSDAYKPLSWVLRLQIALGVAQALDYLHSTFSPPVAHGNLKAANILLDENLMPCVCDCGLAILRPLTSNQVNSCLKQLHVEINGILVDEEALLVKVIVLYPKDFVSQMLQNEPEADHFGDCWKQGSEIAREDAGYIAPDHGQLEIGNTNSDVYAFGVLLLELLTGRKPFDDSRPREEQFLAKWASSRLHDNESLEQMVDPGIQKTVSTKALSRYADIVSLCIQPVKEFRPSMSGVVDSLISFSKMLNTGMPKSGAVAADGADFDTLDRSFRSTNTRFMGSPALSYVSA 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2498 791 MobiDBLite consensus disorder prediction 334 368 - -
Dere01g2498 791 Pfam Leucine Rich Repeat 95 118 IPR001611 GO:0005515
Dere01g2498 791 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Dere01g2498 791 MobiDBLite consensus disorder prediction 334 392 - -
Dere01g2498 791 Gene3D Ribonuclease Inhibitor 30 286 IPR032675 -
Dere01g2498 791 Gene3D Transferase(Phosphotransferase) domain 1 495 756 - -
Dere01g2498 791 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 254 - -
Dere01g2498 791 MobiDBLite consensus disorder prediction 377 392 - -
Dere01g2498 791 SUPERFAMILY L domain-like 36 237 - -
Dere01g2498 791 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 381 493 - -
Dere01g2498 791 ProSiteProfiles Protein kinase domain profile. 416 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2498 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 744 IPR046959 -
Dere01g2498 791 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Dere01g2498 791 SUPERFAMILY Protein kinase-like (PK-like) 392 742 IPR011009 -
Dere01g2498 791 Pfam Protein tyrosine and serine/threonine kinase 638 742 IPR001245 GO:0004672|GO:0006468
Dere01g2498 791 Pfam Protein tyrosine and serine/threonine kinase 421 567 IPR001245 GO:0004672|GO:0006468
Dere01g2498 791 Gene3D Phosphorylase Kinase; domain 1 379 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2498 Dere-ChrDere01 39742168 39747482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2498 1 791 Strubbelig Receptor Gene Family AT5G06820 48.741 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere01g2498 PK_Tyr_Ser-Thr 1.7e-21 CL0016