Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2495 ATGGCGGGAATTGGTTTCTTCTCCTGCCTTTCCTCCTCCAGCAACTTAGGGACATCTTGGTTGGTATTAAAATCTCACAATGCAAGGACCATGCCAGGGAAACTACCTGGAAGGAGAAGTTTGACAATAAAAGCTGAAGTGAAGTATGTAAATGCCGAACAAGCGAAAGAACTTATAGCAGTCGAAGGATACACAGTTCTGGATGTGAGGGATATAACCCAGTTCGACCGAGCTCACATAAAATCATGCTATCATGTGCCTCTTTTTGTTGAAAATCGGGACAATGATCTCGGTACAATTATAAAAAGGACCCTGCACAATAACTTCGCTGGGTTGCTCTTTGGGTTGCCATTCACTAAATTAAATCCTGATTTTGTGCAATCTGTTAAGAGTCAGCTTTCGCCTGAAAGTAAACTCTTGGTTGTATGCCAGGAAGGACTGAGATCTGCTGCTGCAGCAAATAAATTAGGGCAATCTGGTTTTTCAAATATAGCATGCATTACATCCGGCCTTCAAACTGTGAAGCCAGGAACATTTGATTCTGTTGGTTCCACAGAGTTGCAGAATGCTGGCAAAGCTGGTTTGGTGGCAATCCAAGGGCAGATCTCGGCTGTGTTGGGAACTGTTCTTATTTTTGCATATTTGTTCATTACCTTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAACTTGCCCCTGCAGGCTAG 705 0.4355 MAGIGFFSCLSSSSNLGTSWLVLKSHNARTMPGKLPGRRSLTIKAEVKYVNAEQAKELIAVEGYTVLDVRDITQFDRAHIKSCYHVPLFVENRDNDLGTIIKRTLHNNFAGLLFGLPFTKLNPDFVQSVKSQLSPESKLLVVCQEGLRSAAAANKLGQSGFSNIACITSGLQTVKPGTFDSVGSTELQNAGKAGLVAIQGQISAVLGTVLIFAYLFITFFPEQAEKLFQLAPAG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2495 234 Pfam Rhodanese-like domain 52 172 IPR001763 -
Dere01g2495 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 44 172 IPR036873 -
Dere01g2495 234 CDD RHOD 54 175 - -
Dere01g2495 234 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 37 179 - -
Dere01g2495 234 SMART rhod_4 50 180 IPR001763 -
Dere01g2495 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 233 IPR044615 -
Dere01g2495 234 Gene3D - 38 179 IPR036873 -
Dere01g2495 234 ProSiteProfiles Rhodanese domain profile. 60 183 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2495 8 228 Sulfurtransferasese or Rhodanese AT2G42220 67.873 1.49e-111 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2495 01 39722330 39723712 Dere01g2495 01 39722330 39723712 ECH