Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2485 ATGGGTGATGTTGGTGACCATTTTGGTGTCTTTCTCATCTTCCTAGCCTTCTTCATGTTCTTGTTACGAGCCATCTTGGGCAAGCATGAACCCAAAGCCAGGCTTCCCCCAAGCCCTCCAGCCCTACCAGTCATAGGCCACTTCCATCTTCTTGGTCCTCTCCCTCACCAAGCTTTCCACAGTATCTCAAAACGTTATGGTCCTCTGCTTCACCTCTCCTTCGGTTCCAAATCTTGTGTCGTCGTTTCTTCTCCTGACATGGCCAGGGAATGCCTCAAAACCAATGAAGCTTCGTTCTTAAACCGTCCCCAGAAATTCAACCTCGAATATATCACATACGGGCAATCAGATCTTGTGACAGCACCTTACGGACCGTTTTGGAAGTTCATGAGAAAGCTTTGCATGTCTCAACTCCTTGGAGGACCTACAATCCAGTACCACTCCCCTTTCCGAGCTCAGGAACTAAAGCTGTTCTTACACAGTATTCTGGAAAAAGCTCATTCGGGAGAGGAAGTGAATGTTGGGGAGGAGCTAGGGTTGTTGGCGTGTAATGTGATCACCAGAATGGTTCTGAGAAGAAGGTGTTCGGATGTTGAAGATGAAGGACGCCAACTGGTCGAGGTGGTGAAGGAGATGGCTGAGCTTAGTGGGAAATTTAACTTGGGAGATATGGGGTGGTTGTTTAAAAAGTTAGACTTGCAGGGGTTTAGAAAAATACTAAAGAGTGTCCGAAATAGGTACGATGTTATAGTGGAGAGGATTATCAAGGAGCATGAGGAGGCCAGGAGGAGGAAGAAGAAGGATATGGGCAAGGAAGACGAAGCAGCTGAGGGGGATTTGCTTGATATTTTACTAGATATATATGACGATGAAAGTACCGAGATTAAATTGACCAGAGAAAACATCAAGGCCTTCATTATGAACATGATTGGTGCTGGTACTGACACATCGTCTCTGACTGTGACATGGGCACTGGCAGAGCTTATCAATCGCCCAGAAATGATGGAGAAAGCAAGGAAAGAGATTGATTCAGTAGTAGGTAAGGGGAGATTGGTGGAGGAATCTGATATTCCAAACCTTCCATATGTGGAATCAATAGTGAAGGAAACATTGAGACTTCACCCAACAGGACCCCTAGTAGTGAGACAGTCAACTGAAGATTGTGAGATTAATGGGTATTTCATTCCAGCAAAGACCACATTATTCGTGAATGTGTGGTCAATTGGAAGGGACCCAAGCTACTGGGAAAACCCACTTGAGTTCAAACCAGAGAGGTTCTTGAATGAAGAGGGAAAAAGCGAAATGAACTTGAAGCGACAGAATTATGAACTGTTGTCGTTTGGGGCAGGAAAAAGAATCTGCCCGGGTGCTTCACTGGCTATAAAGTTTGTGCCCACAACTCTGGCTGCTATGATGCAGTGTTTTGAATGGAAGTTGGTTCATGAAGGAGAGGTTGACATGGAGGAAGGACCTGGGTTGGCCCTTCCTAGGGCACATCCCTTGCTTTGCATACCAGTGCCTAGAAACCTCTCATTTCTATCTCTCTAA 1548 0.4574 MGDVGDHFGVFLIFLAFFMFLLRAILGKHEPKARLPPSPPALPVIGHFHLLGPLPHQAFHSISKRYGPLLHLSFGSKSCVVVSSPDMARECLKTNEASFLNRPQKFNLEYITYGQSDLVTAPYGPFWKFMRKLCMSQLLGGPTIQYHSPFRAQELKLFLHSILEKAHSGEEVNVGEELGLLACNVITRMVLRRRCSDVEDEGRQLVEVVKEMAELSGKFNLGDMGWLFKKLDLQGFRKILKSVRNRYDVIVERIIKEHEEARRRKKKDMGKEDEAAEGDLLDILLDIYDDESTEIKLTRENIKAFIMNMIGAGTDTSSLTVTWALAELINRPEMMEKARKEIDSVVGKGRLVEESDIPNLPYVESIVKETLRLHPTGPLVVRQSTEDCEINGYFIPAKTTLFVNVWSIGRDPSYWENPLEFKPERFLNEEGKSEMNLKRQNYELLSFGAGKRICPGASLAIKFVPTTLAAMMQCFEWKLVHEGEVDMEEGPGLALPRAHPLLCIPVPRNLSFLSL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2485 515 Pfam Cytochrome P450 36 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 SUPERFAMILY Cytochrome P450 36 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 CDD CYP93 67 505 - -
Dere01g2485 515 Gene3D Cytochrome P450 27 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PANTHER CYTOCHROME P450 98A9 14 508 - -
Dere01g2485 515 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2485 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Dere01g2485 515 FunFam Cytochrome P450 family protein 27 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2485 Dere-ChrDere01 39551710 39553375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2485 7 508 Cytochrome P450 AT5G06900 50.198 0.0 533